Variant report

Variant	rs8094466
Chromosome Location	chr18:40182888-40182889
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1036077	0.85[EUR][1000 genomes]
rs1594436	0.82[ASN][1000 genomes]
rs4545904	0.89[EUR][1000 genomes]
rs595171	0.84[EUR][1000 genomes]
rs595576	0.84[EUR][1000 genomes]
rs610135	0.82[EUR][1000 genomes]
rs645996	0.85[EUR][1000 genomes]
rs6507492	0.89[EUR][1000 genomes]
rs659653	0.88[EUR][1000 genomes]
rs674877	0.85[EUR][1000 genomes]
rs7240077	0.82[ASN][1000 genomes]
rs7244619	0.82[ASN][1000 genomes]
rs725744	0.82[ASN][1000 genomes]
rs9951065	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv525717	chr18:40182606-40185786	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40179600-40186600	Weak transcription	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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