The 2.0 version of rSNPBase

Variant report

Variant rs8102780
Chromosome Location chr19:28278289-28278290
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28261600-28283400 Weak transcription Psoas Muscle Psoas
2 chr19:28264800-28281600 Weak transcription Muscle Satellite Cultured Cells --
3 chr19:28264800-28283600 Weak transcription Brain Substantia Nigra brain
4 chr19:28264800-28283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr19:28265000-28283400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr19:28265200-28281600 Weak transcription HMEC breast
7 chr19:28265200-28283200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr19:28265200-28283600 Weak transcription Brain Hippocampus Middle brain
9 chr19:28266000-28282800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr19:28266600-28282200 Weak transcription Rectal Smooth Muscle rectum
11 chr19:28266600-28282600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr19:28266600-28283400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr19:28266800-28282800 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr19:28267200-28281600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr19:28267200-28281600 Weak transcription Dnd41 blood
16 chr19:28267400-28281600 Weak transcription K562 blood
17 chr19:28267800-28283600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr19:28268400-28282000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr19:28268400-28284000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr19:28268600-28281600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:28268600-28282600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:28268600-28282600 Weak transcription HSMM muscle
23 chr19:28268600-28283600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr19:28268600-28283800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr19:28269000-28282800 Weak transcription Liver Liver
26 chr19:28269000-28283200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr19:28269000-28283800 Weak transcription Left Ventricle heart
28 chr19:28269800-28281800 Weak transcription HSMMtube muscle
29 chr19:28269800-28282600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr19:28269800-28283200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr19:28269800-28283200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:28269800-28283800 Weak transcription Colonic Mucosa Colon
33 chr19:28270200-28282200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr19:28270400-28281600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:28270400-28282600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr19:28270400-28283600 Weak transcription Primary T cells from cord blood blood
37 chr19:28270400-28283800 Weak transcription Ovary ovary
38 chr19:28270600-28282400 Weak transcription H1 Cell Line embryonic stem cell
39 chr19:28271600-28282200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:28271600-28282600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr19:28271600-28282600 Weak transcription Pancreas Pancrea
42 chr19:28271600-28284000 Weak transcription Gastric stomach
43 chr19:28271800-28283800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr19:28272000-28282600 Weak transcription Primary B cells from peripheral blood blood
45 chr19:28272000-28283200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr19:28272000-28283800 Weak transcription Primary T cells fromperipheralblood blood
47 chr19:28272200-28282000 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr19:28272200-28282400 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr19:28272600-28279800 Weak transcription A549 lung
50 chr19:28272600-28282000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015