The 2.0 version of rSNPBase

Variant report

Variant rs8107369
Chromosome Location chr19:44836126-44836127
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44823200-44856200 ZNF genes & repeats Liver Liver
2 chr19:44824800-44841000 ZNF genes & repeats Adipose Nuclei Adipose
3 chr19:44825000-44846600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
4 chr19:44828000-44845000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
5 chr19:44828400-44846400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
6 chr19:44828600-44844200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr19:44828600-44845600 ZNF genes & repeats Fetal Lung lung
8 chr19:44828600-44848800 ZNF genes & repeats Fetal Brain Female brain
9 chr19:44828600-44851000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
10 chr19:44828800-44842600 ZNF genes & repeats Duodenum Mucosa Duodenum
11 chr19:44828800-44846200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
12 chr19:44828800-44846400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr19:44829000-44844000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr19:44829200-44841200 ZNF genes & repeats Primary hematopoietic stem cells blood
15 chr19:44830400-44845000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
16 chr19:44830600-44841200 ZNF genes & repeats Brain Germinal Matrix brain
17 chr19:44830600-44845200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
18 chr19:44830800-44840800 ZNF genes & repeats Fetal Muscle Trunk muscle
19 chr19:44830800-44845600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:44830800-44850400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr19:44831200-44836600 ZNF genes & repeats Ovary ovary
22 chr19:44831200-44838600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr19:44831400-44840000 Strong transcription Skeletal Muscle Male skeletal muscle
24 chr19:44831600-44836800 Strong transcription Brain Anterior Caudate brain
25 chr19:44831600-44838800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr19:44831600-44841200 ZNF genes & repeats Aorta Aorta
27 chr19:44831600-44841400 Strong transcription Placenta Amnion Placenta Amnion
28 chr19:44831600-44846600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr19:44831800-44836400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:44831800-44836600 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
31 chr19:44831800-44837600 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr19:44831800-44838600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:44831800-44838600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr19:44831800-44841200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr19:44831800-44845000 ZNF genes & repeats Fetal Muscle Leg muscle
36 chr19:44831800-44846400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr19:44832000-44845600 Weak transcription Hela-S3 cervix
38 chr19:44832000-44848200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr19:44832400-44841200 ZNF genes & repeats H1 Cell Line embryonic stem cell
40 chr19:44832600-44836400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
41 chr19:44832600-44837600 Strong transcription Fetal Intestine Large intestine
42 chr19:44832600-44839000 Strong transcription HSMM muscle
43 chr19:44833000-44837600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr19:44833400-44836400 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr19:44833600-44837400 Weak transcription Right Ventricle heart
46 chr19:44833800-44837200 Strong transcription Fetal Kidney kidney
47 chr19:44833800-44838600 Weak transcription HMEC breast
48 chr19:44833800-44838800 Weak transcription NHEK skin
49 chr19:44834000-44838800 Weak transcription HSMMtube muscle
50 chr19:44834400-44836200 ZNF genes & repeats Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015