Variant report

Variant	rs8126861
Chromosome Location	chr21:37760844-37760845
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs56382962	0.97[AMR][1000 genomes]
rs67850591	0.90[AMR][1000 genomes]
rs68081676	0.90[AMR][1000 genomes]
rs9754126	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33578	chr21:37488312-37819627	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	esv1796009	chr21:37708503-37763979	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:37758400-37761000	Weak transcription	Right Atrium	heart
2	chr21:37758400-37761200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr21:37758400-37763800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr21:37758400-37772000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr21:37758400-37772000	Weak transcription	Ovary	ovary
6	chr21:37758400-37788000	Weak transcription	Colonic Mucosa	Colon
7	chr21:37758400-37792200	Weak transcription	Fetal Kidney	kidney
8	chr21:37758400-37793400	Weak transcription	Aorta	Aorta
9	chr21:37758400-37794600	Weak transcription	Left Ventricle	heart
10	chr21:37758400-37794800	Weak transcription	Right Ventricle	heart
11	chr21:37758600-37761000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr21:37758600-37761000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr21:37758600-37761000	Weak transcription	Brain Hippocampus Middle	brain
14	chr21:37758600-37761000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr21:37758600-37761000	Weak transcription	Brain Substantia Nigra	brain
16	chr21:37758600-37761000	Weak transcription	NH-A	brain
17	chr21:37758600-37761200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr21:37758600-37761200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr21:37758600-37761200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr21:37758600-37761200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr21:37758600-37761200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr21:37758600-37761200	Weak transcription	Brain Angular Gyrus	brain
23	chr21:37758600-37761200	Weak transcription	Fetal Brain Female	brain
24	chr21:37758600-37762600	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr21:37758600-37763400	Weak transcription	Small Intestine	intestine
26	chr21:37758600-37766800	Weak transcription	Monocytes-CD14+_RO01746	blood
27	chr21:37758600-37767000	Weak transcription	Thymus	Thymus
28	chr21:37758600-37767400	Weak transcription	Primary monocytes fromperipheralblood	blood
29	chr21:37758600-37767400	Weak transcription	Primary neutrophils fromperipheralblood	blood
30	chr21:37758600-37767400	Weak transcription	Lung	lung
31	chr21:37758600-37769000	Weak transcription	Osteobl	bone
32	chr21:37758600-37770000	Weak transcription	Fetal Intestine Small	intestine
33	chr21:37758600-37773000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr21:37758600-37774600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr21:37758600-37774600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr21:37758600-37774800	Weak transcription	Primary T helper cells PMA-I stimulated	--
37	chr21:37758600-37774800	Weak transcription	NHDF-Ad	bronchial
38	chr21:37758600-37775200	Weak transcription	Primary T cells from cord blood	blood
39	chr21:37758600-37777400	Weak transcription	Rectal Smooth Muscle	rectum
40	chr21:37758600-37777600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
41	chr21:37758600-37780400	Weak transcription	HUVEC	blood vessel
42	chr21:37758600-37783600	Weak transcription	Brain Germinal Matrix	brain
43	chr21:37758600-37783800	Weak transcription	Sigmoid Colon	Sigmoid Colon
44	chr21:37758600-37783800	Weak transcription	Spleen	Spleen
45	chr21:37758600-37785000	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr21:37758600-37785000	Weak transcription	Stomach Smooth Muscle	stomach
47	chr21:37758600-37785600	Weak transcription	Adipose Nuclei	Adipose
48	chr21:37758600-37787400	Weak transcription	Primary B cells from cord blood	blood
49	chr21:37758600-37790600	Weak transcription	Brain Anterior Caudate	brain
50	chr21:37758600-37790800	Weak transcription	Primary B cells from peripheral blood	blood

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