Variant report

Variant	rs8132017
Chromosome Location	chr21:28087725-28087726
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs60921040	1.00[AFR][1000 genomes]
rs73355614	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv459223	chr21:28070037-28092531	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv587337	chr21:28070037-28092531	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:28082800-28088400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:28083000-28088200	Weak transcription	Dnd41	blood
3	chr21:28083000-28088400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr21:28083400-28088400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr21:28083600-28088000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr21:28087200-28087800	Enhancers	Placenta Amnion	Placenta Amnion
7	chr21:28087200-28088600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr21:28087200-28088800	Enhancers	Placenta	Placenta
9	chr21:28087600-28088400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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