Variant report

Variant rs816408
Chromosome Location chr7:56173970-56173971
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:56172200-56174800 Active TSS GM12878-XiMat blood
2 chr7:56172200-56175000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr7:56172600-56174800 Active TSS Psoas Muscle Psoas
4 chr7:56172600-56175000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr7:56172600-56175000 Active TSS HSMM muscle
6 chr7:56172800-56174000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr7:56172800-56174600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
8 chr7:56172800-56174800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr7:56172800-56174800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr7:56172800-56174800 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr7:56172800-56174800 Active TSS Muscle Satellite Cultured Cells --
12 chr7:56172800-56174800 Active TSS Pancreatic Islets Pancreatic Islet
13 chr7:56172800-56174800 Active TSS Rectal Smooth Muscle rectum
14 chr7:56172800-56174800 Active TSS HMEC breast
15 chr7:56172800-56175000 Active TSS NHLF lung
16 chr7:56173000-56174200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
17 chr7:56173000-56174600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
18 chr7:56173000-56174600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
19 chr7:56173000-56174600 Active TSS Ovary ovary
20 chr7:56173000-56174800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr7:56173000-56174800 Active TSS HUES6 Cell Line embryonic stem cell
22 chr7:56173000-56174800 Active TSS HUES64 Cell Line embryonic stem cell
23 chr7:56173000-56174800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
24 chr7:56173000-56174800 Active TSS Right Ventricle heart
25 chr7:56173000-56174800 Active TSS Thymus Thymus
26 chr7:56173000-56175000 Active TSS iPS-18 Cell Line embryonic stem cell
27 chr7:56173000-56175000 Active TSS Right Atrium heart
28 chr7:56173000-56175200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
29 chr7:56173200-56174000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
30 chr7:56173200-56174200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr7:56173200-56174200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr7:56173200-56174200 Active TSS Gastric stomach
33 chr7:56173200-56174400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:56173200-56174600 Active TSS ES-WA7 Cell Line embryonic stem cell
35 chr7:56173200-56174600 Active TSS H1 Cell Line embryonic stem cell
36 chr7:56173200-56174600 Active TSS H9 Cell Line embryonic stem cell
37 chr7:56173200-56174600 Active TSS HUES48 Cell Line embryonic stem cell
38 chr7:56173200-56174600 Active TSS iPS-15b Cell Line embryonic stem cell
39 chr7:56173200-56174600 Active TSS Esophagus oesophagus
40 chr7:56173200-56174600 Active TSS Fetal Kidney kidney
41 chr7:56173200-56174600 Active TSS Left Ventricle heart
42 chr7:56173200-56174600 Active TSS Stomach Mucosa stomach
43 chr7:56173200-56174800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr7:56173200-56174800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr7:56173200-56174800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr7:56173200-56174800 Active TSS Colonic Mucosa Colon
47 chr7:56173200-56174800 Active TSS Fetal Intestine Large intestine
48 chr7:56173200-56174800 Active TSS Fetal Intestine Small intestine
49 chr7:56173200-56174800 Active TSS Placenta Amnion Placenta Amnion
50 chr7:56173200-56174800 Active TSS A549 lung

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