The 2.0 version of rSNPBase

Variant report

Variant rs8176565
Chromosome Location chr2:188337982-188337983
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:188313400-188340000 Weak transcription Fetal Brain Male brain
2 chr2:188326800-188341800 Weak transcription Adipose Nuclei Adipose
3 chr2:188326800-188353600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:188326800-188357600 Weak transcription Duodenum Mucosa Duodenum
5 chr2:188326800-188357800 Weak transcription Lung lung
6 chr2:188327000-188339200 Weak transcription Fetal Intestine Small intestine
7 chr2:188327000-188357800 Weak transcription Left Ventricle heart
8 chr2:188327200-188357600 Weak transcription Fetal Intestine Large intestine
9 chr2:188327400-188339000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:188327600-188341200 Weak transcription NHDF-Ad bronchial
11 chr2:188328200-188342200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:188328200-188357600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr2:188328200-188360000 Weak transcription Psoas Muscle Psoas
14 chr2:188328400-188341800 Weak transcription NHLF lung
15 chr2:188328400-188343400 Weak transcription Fetal Muscle Leg muscle
16 chr2:188328400-188365400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr2:188328600-188357200 Weak transcription Fetal Muscle Trunk muscle
18 chr2:188328800-188342000 Weak transcription HSMMtube muscle
19 chr2:188328800-188343000 Weak transcription Fetal Stomach stomach
20 chr2:188329000-188341800 Strong transcription HSMM muscle
21 chr2:188329000-188358000 Weak transcription K562 blood
22 chr2:188329200-188340200 Weak transcription Hela-S3 cervix
23 chr2:188329200-188347800 Strong transcription Liver Liver
24 chr2:188329800-188338600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:188330600-188344400 Weak transcription Fetal Lung lung
26 chr2:188332000-188340200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr2:188332800-188357600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr2:188333600-188341200 Weak transcription NH-A brain
29 chr2:188334000-188339600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr2:188334200-188374600 Weak transcription Placenta Amnion Placenta Amnion
31 chr2:188334600-188348200 Weak transcription A549 lung
32 chr2:188335000-188342200 Weak transcription Small Intestine intestine
33 chr2:188335200-188340200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:188335600-188341800 Weak transcription Primary hematopoietic stem cells blood
35 chr2:188336800-188344200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr2:188336800-188345800 Strong transcription HUVEC blood vessel
37 chr2:188337200-188339200 Strong transcription Placenta Placenta
38 chr2:188337200-188342200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr2:188337200-188354000 Strong transcription HepG2 liver
40 chr2:188337400-188338200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:188337400-188338600 Strong transcription Osteobl bone
42 chr2:188337400-188338800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:188337400-188339600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:188337400-188339600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:188337800-188341000 Strong transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015