Variant report

Variant	rs8178210
Chromosome Location	chr8:48729960-48729961
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:48722614..48724297-chr8:48728377..48729994,3	K562	blood:
2	chr8:48722614..48724418-chr8:48728468..48731244,3	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73571488	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803608	chr8:48506628-48874811	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv1021389	chr8:48700970-48880931	Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv539599	chr8:48700970-48880931	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:48684200-48733800	Strong transcription	HUES6 Cell Line	embryonic stem cell
2	chr8:48684200-48733800	Strong transcription	HUES64 Cell Line	embryonic stem cell
3	chr8:48684200-48734200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
4	chr8:48684400-48755200	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr8:48684400-48778800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr8:48684400-48861600	Strong transcription	Dnd41	blood
7	chr8:48685000-48818800	Strong transcription	Fetal Thymus	thymus
8	chr8:48685200-48734000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
9	chr8:48685600-48733600	Strong transcription	HUES48 Cell Line	embryonic stem cell
10	chr8:48693800-48751000	Weak transcription	Right Atrium	heart
11	chr8:48700000-48758800	Strong transcription	Primary T cells fromperipheralblood	blood
12	chr8:48703000-48733600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr8:48703000-48761800	Weak transcription	Stomach Mucosa	stomach
14	chr8:48704200-48737400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr8:48704800-48756000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:48711200-48741400	Weak transcription	Fetal Heart	heart
17	chr8:48711400-48740200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
18	chr8:48715000-48734600	Weak transcription	Fetal Brain Male	brain
19	chr8:48716200-48734200	Weak transcription	Brain Angular Gyrus	brain
20	chr8:48716400-48733800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr8:48716400-48734000	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr8:48716600-48733800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
23	chr8:48718800-48733400	Weak transcription	Brain Cingulate Gyrus	brain
24	chr8:48719200-48731400	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr8:48719800-48731400	Weak transcription	Pancreas	Pancrea
26	chr8:48722200-48778600	Strong transcription	Primary monocytes fromperipheralblood	blood
27	chr8:48722600-48731400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr8:48722600-48731400	Weak transcription	Spleen	Spleen
29	chr8:48722600-48798800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr8:48722800-48733600	Weak transcription	Rectal Smooth Muscle	rectum
31	chr8:48723000-48793400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr8:48724800-48755800	Strong transcription	Hela-S3	cervix
33	chr8:48725800-48735400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr8:48726000-48730400	Strong transcription	Fetal Muscle Leg	muscle
35	chr8:48726000-48737600	Strong transcription	Placenta	Placenta
36	chr8:48726000-48739200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr8:48726000-48744800	Strong transcription	Primary T helper cells PMA-I stimulated	--
38	chr8:48726000-48756800	Strong transcription	Duodenum Mucosa	Duodenum
39	chr8:48726000-48778800	Strong transcription	Primary B cells from peripheral blood	blood
40	chr8:48726200-48730000	Strong transcription	Fetal Intestine Small	intestine
41	chr8:48726200-48731400	Strong transcription	H1 Cell Line	embryonic stem cell
42	chr8:48726200-48733400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr8:48726200-48735600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr8:48726200-48737400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr8:48726200-48738000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr8:48726200-48738200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr8:48726200-48738200	Strong transcription	A549	lung
48	chr8:48726200-48739200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr8:48726200-48747200	Strong transcription	Liver	Liver
50	chr8:48726200-48755800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood

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