Variant report

Variant	rs8191329
Chromosome Location	chr16:11770177-11770178
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:11768556..11771119-chr16:11783391..11785154,2	MCF-7	breast:
2	chr16:11769945..11772766-chr16:11772920..11775333,2	MCF-7	breast:
3	chr16:11769010..11770946-chr16:11776974..11779938,2	MCF-7	breast:
4	chr16:11770012..11772051-chr16:11775630..11778443,2	K562	blood:

Variant related genes	Relation type
ENSG00000153066	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs8191321	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037143	chr16:11454248-11913932	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv457409	chr16:11542894-11822066	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv571456	chr16:11542894-11822066	Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv524676	chr16:11569454-11795579	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:11763400-11775800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr16:11763600-11795600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr16:11764000-11770200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr16:11764000-11771200	Weak transcription	Osteobl	bone
5	chr16:11764000-11772200	Enhancers	HMEC	breast
6	chr16:11764800-11770800	Genic enhancers	Fetal Muscle Leg	muscle
7	chr16:11764800-11773400	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr16:11764800-11780000	Genic enhancers	Fetal Muscle Trunk	muscle
9	chr16:11765000-11774200	Genic enhancers	Spleen	Spleen
10	chr16:11765000-11783200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr16:11765200-11770200	Enhancers	HepG2	liver
12	chr16:11765400-11771800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr16:11765600-11771200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr16:11766000-11770800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr16:11766600-11779200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr16:11767000-11771200	Weak transcription	Fetal Heart	heart
17	chr16:11767000-11772200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
18	chr16:11767000-11773600	Weak transcription	K562	blood
19	chr16:11767200-11770200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr16:11767200-11770800	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr16:11767200-11773200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
22	chr16:11767200-11774200	Genic enhancers	Primary B cells from peripheral blood	blood
23	chr16:11767200-11774400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr16:11767400-11771200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
25	chr16:11767400-11774800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr16:11767600-11770200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr16:11767800-11773800	Genic enhancers	Primary B cells from cord blood	blood
28	chr16:11767800-11774400	Strong transcription	Primary T cells from cord blood	blood
29	chr16:11767800-11775400	Strong transcription	Thymus	Thymus
30	chr16:11768000-11770200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr16:11768000-11772400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr16:11768000-11772600	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr16:11768200-11772400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr16:11768200-11772400	Genic enhancers	Esophagus	oesophagus
35	chr16:11768200-11772800	Genic enhancers	Fetal Thymus	thymus
36	chr16:11768400-11806600	Strong transcription	Dnd41	blood
37	chr16:11768600-11770600	Enhancers	HSMMtube	muscle
38	chr16:11768600-11775000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr16:11768800-11770400	Weak transcription	Small Intestine	intestine
40	chr16:11768800-11772200	Weak transcription	Primary hematopoietic stem cells	blood
41	chr16:11768800-11773200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
42	chr16:11769000-11770400	Strong transcription	Monocytes-CD14+_RO01746	blood
43	chr16:11769000-11770600	Strong transcription	Primary neutrophils fromperipheralblood	blood
44	chr16:11769000-11770800	Strong transcription	Brain Hippocampus Middle	brain
45	chr16:11769000-11771000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
46	chr16:11769000-11771800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr16:11769000-11771800	Strong transcription	Fetal Brain Female	brain
48	chr16:11769000-11775000	Strong transcription	Cortex derived primary cultured neurospheres	brain
49	chr16:11769000-11775200	Strong transcription	Brain Germinal Matrix	brain
50	chr16:11769000-11775200	Weak transcription	Right Atrium	heart

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