Variant report

Variant	rs8192663
Chromosome Location	chr10:117971244-117971245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:117968387..117969891-chr10:117970259..117972520,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11197615	1.00[ASW][hapmap]
rs3781557	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428568	chr10:117806874-117972993	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv3449389	chr10:117806874-118102404	Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv832000	chr10:117944492-118116253	Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117968600-117971600	Enhancers	Fetal Stomach	stomach
2	chr10:117969400-117971400	Enhancers	Fetal Muscle Leg	muscle
3	chr10:117969400-117971400	Enhancers	HSMMtube	muscle
4	chr10:117969400-117973400	Enhancers	HSMM	muscle
5	chr10:117969600-117971400	Enhancers	Rectal Smooth Muscle	rectum
6	chr10:117970000-117971400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr10:117970200-117971600	Enhancers	Muscle Satellite Cultured Cells	--
8	chr10:117970200-117973400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr10:117970200-117973400	Enhancers	Liver	Liver
10	chr10:117970400-117971400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr10:117970400-117971400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr10:117970400-117971400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:117970400-117971400	Enhancers	NH-A	brain
14	chr10:117970400-117971400	Enhancers	NHLF	lung
15	chr10:117970400-117971600	Enhancers	Osteobl	bone
16	chr10:117970400-117972000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr10:117970600-117973200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr10:117970800-117971400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr10:117970800-117974800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr10:117970800-117975000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr10:117970800-117975400	Weak transcription	Fetal Intestine Small	intestine
22	chr10:117971000-117975000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr10:117971000-117975200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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