The 2.0 version of rSNPBase

Variant report

Variant rs841684
Chromosome Location chr1:95057293-95057294
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95046000-95065400 Weak transcription Fetal Intestine Large intestine
2 chr1:95053800-95057800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:95055000-95059200 Enhancers Brain Cingulate Gyrus brain
4 chr1:95055000-95061400 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:95055000-95061600 Enhancers Brain Anterior Caudate brain
6 chr1:95055000-95062000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:95055200-95057600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:95055200-95057600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:95055200-95059200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:95055400-95061800 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:95055800-95057600 Weak transcription Brain Germinal Matrix brain
12 chr1:95055800-95058200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:95056000-95059000 Weak transcription Placenta Placenta
14 chr1:95056200-95058200 Weak transcription Stomach Mucosa stomach
15 chr1:95056200-95067800 Weak transcription Gastric stomach
16 chr1:95056400-95057800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:95056400-95060200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:95056400-95060600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:95056400-95061000 Weak transcription Fetal Intestine Small intestine
20 chr1:95056400-95061400 Weak transcription Fetal Lung lung
21 chr1:95056600-95057600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:95056600-95058400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:95056600-95058600 Weak transcription Fetal Stomach stomach
24 chr1:95056600-95060000 Weak transcription Hela-S3 cervix
25 chr1:95056600-95060600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:95056600-95060600 Weak transcription Rectal Smooth Muscle rectum
27 chr1:95056600-95060800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:95056600-95060800 Enhancers Brain Inferior Temporal Lobe brain
29 chr1:95056800-95059200 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:95056800-95059600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:95056800-95061000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:95056800-95061200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:95056800-95061200 Weak transcription NHLF lung
34 chr1:95056800-95069000 Weak transcription Right Atrium heart
35 chr1:95057000-95060600 Enhancers Brain Substantia Nigra brain
36 chr1:95057000-95061600 Enhancers Brain Hippocampus Middle brain
37 chr1:95057200-95057400 Enhancers Aorta Aorta
38 chr1:95057200-95061000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015