Variant report

Variant	rs844665
Chromosome Location	chr1:173248957-173248958
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs3861953	0.82[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap]
rs844646	0.86[ASN][1000 genomes]
rs844664	1.00[CEU][hapmap]
rs844666	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173247800-173249400	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr1:173248000-173249000	Enhancers	H1 Cell Line	embryonic stem cell
3	chr1:173248000-173249600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr1:173248200-173250000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr1:173248600-173249600	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr1:173248600-173251000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr1:173248800-173249000	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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