Variant report

Variant rs846454
Chromosome Location chr2:33243040-33243041
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33237600-33246000 Weak transcription Brain Germinal Matrix brain
2 chr2:33239200-33243400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:33239600-33245800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:33239600-33246000 Weak transcription Aorta Aorta
5 chr2:33239600-33246000 Weak transcription Fetal Kidney kidney
6 chr2:33239800-33243200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:33239800-33243400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr2:33239800-33245800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:33239800-33245800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr2:33239800-33246000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:33240000-33245800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:33240000-33246000 Weak transcription NH-A brain
13 chr2:33240400-33244200 Enhancers Fetal Heart heart
14 chr2:33240400-33246000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:33240400-33246400 Weak transcription Stomach Smooth Muscle stomach
16 chr2:33240600-33244200 Enhancers A549 lung
17 chr2:33241200-33248000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr2:33241200-33249800 Weak transcription Esophagus oesophagus
19 chr2:33241400-33243200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr2:33241400-33243400 Weak transcription Left Ventricle heart
21 chr2:33241400-33245800 Weak transcription Fetal Intestine Large intestine
22 chr2:33241400-33246200 Weak transcription NHLF lung
23 chr2:33241400-33246800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr2:33241400-33246800 Weak transcription Muscle Satellite Cultured Cells --
25 chr2:33241400-33246800 Weak transcription Placenta Amnion Placenta Amnion
26 chr2:33241400-33247000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:33241400-33247000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr2:33241600-33243400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr2:33241600-33243400 Weak transcription K562 blood
30 chr2:33241600-33246800 Weak transcription Osteobl bone
31 chr2:33241800-33243400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr2:33241800-33245600 Weak transcription Fetal Intestine Small intestine
33 chr2:33241800-33247600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:33241800-33248000 Weak transcription Duodenum Mucosa Duodenum
35 chr2:33241800-33248600 Weak transcription Small Intestine intestine
36 chr2:33241800-33248600 Weak transcription Stomach Mucosa stomach
37 chr2:33241800-33249600 Weak transcription Fetal Muscle Leg muscle
38 chr2:33242200-33249600 Weak transcription Liver Liver
39 chr2:33242400-33243800 Enhancers Right Atrium heart
40 chr2:33242600-33243200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:33242600-33248600 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr2:33242600-33249600 Weak transcription Right Ventricle heart
43 chr2:33243000-33244000 Enhancers HepG2 liver
44 chr2:33243000-33244200 Enhancers HSMMtube muscle
45 chr2:33243000-33244400 Enhancers NHDF-Ad bronchial

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