Variant report

Variant rs852522
Chromosome Location chr7:5693543-5693544
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5660600-5693800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr7:5674800-5693600 Strong transcription Dnd41 blood
3 chr7:5674800-5728200 Weak transcription Small Intestine intestine
4 chr7:5676000-5693800 Strong transcription Fetal Intestine Small intestine
5 chr7:5677000-5701400 Weak transcription Fetal Brain Male brain
6 chr7:5677200-5707200 Weak transcription Stomach Mucosa stomach
7 chr7:5677400-5706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr7:5677600-5693600 Strong transcription Stomach Smooth Muscle stomach
9 chr7:5677600-5694000 Strong transcription Fetal Stomach stomach
10 chr7:5679200-5706000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr7:5679400-5701600 Weak transcription Fetal Heart heart
12 chr7:5683400-5697600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr7:5683600-5693800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr7:5683600-5710400 Weak transcription Colonic Mucosa Colon
15 chr7:5684800-5694000 Strong transcription Primary T cells fromperipheralblood blood
16 chr7:5685000-5694000 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr7:5685200-5693800 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr7:5685800-5693800 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr7:5688400-5693800 Strong transcription HSMM muscle
20 chr7:5688400-5694000 Strong transcription GM12878-XiMat blood
21 chr7:5688600-5693800 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr7:5688600-5693800 Strong transcription Primary monocytes fromperipheralblood blood
23 chr7:5689200-5694000 Strong transcription Gastric stomach
24 chr7:5689800-5704000 Weak transcription Fetal Brain Female brain
25 chr7:5690000-5701400 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr7:5690200-5699000 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:5690200-5701400 Weak transcription Brain Germinal Matrix brain
28 chr7:5690200-5704000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr7:5690200-5706000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr7:5690400-5693800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr7:5690400-5701400 Weak transcription NHDF-Ad bronchial
32 chr7:5690400-5702400 Weak transcription Psoas Muscle Psoas
33 chr7:5690600-5701000 Weak transcription Rectal Smooth Muscle rectum
34 chr7:5690600-5704200 Weak transcription H1 Cell Line embryonic stem cell
35 chr7:5690600-5704200 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr7:5690800-5696000 Weak transcription Esophagus oesophagus
37 chr7:5690800-5701000 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr7:5690800-5704000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr7:5691000-5695800 Weak transcription Placenta Placenta
40 chr7:5691000-5701600 Weak transcription Right Ventricle heart
41 chr7:5691000-5712000 Weak transcription Fetal Kidney kidney
42 chr7:5691200-5721000 Weak transcription Pancreas Pancrea
43 chr7:5691400-5693800 Weak transcription Muscle Satellite Cultured Cells --
44 chr7:5691600-5693800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr7:5691600-5693800 Strong transcription NHLF lung
46 chr7:5691600-5695400 Enhancers Brain Substantia Nigra brain
47 chr7:5691800-5701600 Weak transcription Fetal Lung lung
48 chr7:5692000-5694400 Genic enhancers Fetal Muscle Leg muscle
49 chr7:5692000-5694800 Enhancers Brain Inferior Temporal Lobe brain
50 chr7:5692000-5695400 Weak transcription Spleen Spleen

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