Variant report

Variant rs852531
Chromosome Location chr7:5597677-5597678
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5594800-5598600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
2 chr7:5594800-5598800 Flanking Active TSS Primary B cells from peripheral blood blood
3 chr7:5594800-5599000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr7:5596200-5598600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr7:5596200-5598600 Enhancers Fetal Heart heart
6 chr7:5596200-5598600 Enhancers Fetal Lung lung
7 chr7:5596400-5598600 Flanking Active TSS Primary B cells from cord blood blood
8 chr7:5596400-5598600 Flanking Active TSS Primary hematopoietic stem cells blood
9 chr7:5596400-5598600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
10 chr7:5596400-5598600 Flanking Active TSS GM12878-XiMat blood
11 chr7:5596400-5598600 Flanking Active TSS Hela-S3 cervix
12 chr7:5596400-5598800 Flanking Active TSS Primary monocytes fromperipheralblood blood
13 chr7:5596400-5599000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr7:5596400-5599000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
15 chr7:5596400-5599000 Enhancers Cortex derived primary cultured neurospheres brain
16 chr7:5596400-5599000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr7:5596400-5599800 Enhancers Spleen Spleen
18 chr7:5596400-5601800 Weak transcription Ovary ovary
19 chr7:5596600-5598000 Flanking Active TSS A549 lung
20 chr7:5596600-5598200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr7:5596600-5598600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr7:5596600-5598600 Flanking Active TSS Colon Smooth Muscle Colon
23 chr7:5596600-5598600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
24 chr7:5596600-5598600 Enhancers Fetal Intestine Large intestine
25 chr7:5596600-5598600 Enhancers HMEC breast
26 chr7:5596600-5598600 Enhancers HSMMtube muscle
27 chr7:5596600-5598600 Enhancers NHDF-Ad bronchial
28 chr7:5596600-5598800 Enhancers Placenta Placenta
29 chr7:5596600-5598800 Flanking Active TSS Stomach Smooth Muscle stomach
30 chr7:5596600-5599000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr7:5596600-5599000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr7:5596600-5599000 Enhancers Esophagus oesophagus
33 chr7:5596600-5599000 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr7:5596600-5599000 Enhancers HUVEC blood vessel
35 chr7:5596600-5601800 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr7:5596600-5601800 Weak transcription Fetal Kidney kidney
37 chr7:5596800-5597800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr7:5596800-5597800 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr7:5596800-5597800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr7:5596800-5598000 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr7:5596800-5598200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr7:5596800-5598200 Weak transcription Brain Germinal Matrix brain
43 chr7:5596800-5598200 Weak transcription Brain Inferior Temporal Lobe brain
44 chr7:5596800-5598400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr7:5596800-5598400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:5596800-5598400 Enhancers Gastric stomach
47 chr7:5596800-5598600 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr7:5596800-5598600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr7:5596800-5598600 Enhancers Fetal Intestine Small intestine
50 chr7:5596800-5598600 Enhancers Left Ventricle heart

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