Variant report

Variant rs852534
Chromosome Location chr7:5595793-5595794
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5594200-5595800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
2 chr7:5594200-5595800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr7:5594200-5596000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr7:5594400-5595800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr7:5594400-5596000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
6 chr7:5594400-5596000 Bivalent Enhancer Fetal Brain Male brain
7 chr7:5594400-5596400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
8 chr7:5594400-5596800 Active TSS H9 Cell Line embryonic stem cell
9 chr7:5594400-5596800 Flanking Active TSS Fetal Muscle Leg muscle
10 chr7:5594600-5595800 Enhancers Fetal Heart heart
11 chr7:5594600-5596400 Active TSS Ovary ovary
12 chr7:5594600-5596600 Active TSS HUES48 Cell Line embryonic stem cell
13 chr7:5594600-5596600 Active TSS iPS-15b Cell Line embryonic stem cell
14 chr7:5594600-5596600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr7:5594600-5596600 Active TSS Colon Smooth Muscle Colon
16 chr7:5594600-5596600 Active TSS Pancreatic Islets Pancreatic Islet
17 chr7:5594600-5596800 Active TSS Psoas Muscle Psoas
18 chr7:5594800-5596000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
19 chr7:5594800-5596600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr7:5594800-5596600 Active TSS Aorta Aorta
21 chr7:5594800-5596800 Active TSS Small Intestine intestine
22 chr7:5594800-5598600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
23 chr7:5594800-5598800 Flanking Active TSS Primary B cells from peripheral blood blood
24 chr7:5594800-5599000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr7:5595000-5595800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr7:5595000-5595800 Flanking Active TSS Primary B cells from cord blood blood
27 chr7:5595000-5595800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr7:5595000-5595800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
29 chr7:5595000-5595800 Flanking Active TSS Adipose Nuclei Adipose
30 chr7:5595000-5595800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
31 chr7:5595000-5595800 Flanking Active TSS Brain Hippocampus Middle brain
32 chr7:5595000-5595800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr7:5595000-5595800 Flanking Active TSS Fetal Intestine Large intestine
34 chr7:5595000-5595800 Flanking Active TSS Fetal Muscle Trunk muscle
35 chr7:5595000-5595800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
36 chr7:5595000-5595800 Flanking Bivalent TSS/Enh Thymus Thymus
37 chr7:5595000-5595800 Flanking Active TSS Spleen Spleen
38 chr7:5595000-5595800 Flanking Active TSS GM12878-XiMat blood
39 chr7:5595000-5595800 Flanking Active TSS HUVEC blood vessel
40 chr7:5595000-5596000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr7:5595000-5596000 Flanking Active TSS Primary hematopoietic stem cells blood
42 chr7:5595000-5596000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
43 chr7:5595000-5596000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr7:5595000-5596000 Flanking Active TSS Liver Liver
45 chr7:5595000-5596000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
46 chr7:5595000-5596200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
47 chr7:5595000-5596200 Flanking Active TSS Muscle Satellite Cultured Cells --
48 chr7:5595000-5596400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr7:5595000-5596600 Active TSS ES-I3 Cell Line embryonic stem cell
50 chr7:5595000-5596600 Active TSS iPS-20b Cell Line embryonic stem cell

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