The 2.0 version of rSNPBase

Variant report

Variant rs861365
Chromosome Location chr5:79915807-79915808
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79902400-79916600 Weak transcription Thymus Thymus
2 chr5:79904800-79925000 Weak transcription Primary B cells from cord blood blood
3 chr5:79906600-79949200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:79909400-79916200 Weak transcription Primary neutrophils fromperipheralblood blood
5 chr5:79909800-79927200 Weak transcription Primary T cells from cord blood blood
6 chr5:79910600-79927000 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr5:79911600-79925400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr5:79911600-79925400 Weak transcription Adipose Nuclei Adipose
9 chr5:79911800-79916200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:79911800-79916200 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:79911800-79925200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr5:79911800-79927200 Weak transcription HMEC breast
13 chr5:79912000-79926400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr5:79912000-79926600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr5:79912000-79938000 Weak transcription Brain Anterior Caudate brain
16 chr5:79912200-79928600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr5:79912200-79948000 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr5:79912400-79925000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:79912800-79925200 Weak transcription Fetal Thymus thymus
20 chr5:79913200-79925200 Weak transcription Hela-S3 cervix
21 chr5:79913200-79949000 Weak transcription Spleen Spleen
22 chr5:79913400-79921400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:79913400-79926800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:79913600-79925000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr5:79913600-79949400 Weak transcription Esophagus oesophagus
26 chr5:79913800-79927200 Weak transcription A549 lung
27 chr5:79914200-79949400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr5:79914400-79916800 Strong transcription Dnd41 blood
29 chr5:79914600-79925600 Weak transcription Fetal Stomach stomach
30 chr5:79914800-79916200 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr5:79914800-79916400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr5:79914800-79927400 Weak transcription H9 Cell Line embryonic stem cell
33 chr5:79915000-79916200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr5:79915400-79919400 Weak transcription Fetal Intestine Small intestine
35 chr5:79915400-79925000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr5:79915400-79925600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr5:79915400-79949200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr5:79915600-79919400 Weak transcription Fetal Intestine Large intestine
39 chr5:79915600-79934600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr5:79915800-79916600 Enhancers NH-A brain
41 chr5:79915800-79916800 Enhancers HSMMtube muscle
42 chr5:79915800-79920200 Enhancers Monocytes-CD14+_RO01746 blood
43 chr5:79915800-79925200 Weak transcription Muscle Satellite Cultured Cells --
44 chr5:79915800-79925400 Weak transcription Fetal Muscle Leg muscle
45 chr5:79915800-79927200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015