Variant report

Variant rs861858
Chromosome Location chr22:21954557-21954558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21937800-21965400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr22:21939600-21983200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr22:21942600-21960800 Weak transcription Small Intestine intestine
4 chr22:21943400-21963600 Strong transcription Fetal Intestine Small intestine
5 chr22:21945000-21955200 Strong transcription Fetal Stomach stomach
6 chr22:21946200-21954600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr22:21946400-21960200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr22:21946400-21980200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr22:21948800-21965200 Weak transcription Fetal Kidney kidney
10 chr22:21949200-21960400 Weak transcription Fetal Heart heart
11 chr22:21949200-21976600 Weak transcription Fetal Brain Male brain
12 chr22:21949400-21960200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr22:21949400-21965400 Weak transcription Hela-S3 cervix
14 chr22:21949600-21956400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr22:21949600-21965200 Weak transcription Colon Smooth Muscle Colon
16 chr22:21949800-21956400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr22:21949800-21956400 Weak transcription Ovary ovary
18 chr22:21949800-21956600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr22:21949800-21956600 Weak transcription HSMMtube muscle
20 chr22:21949800-21960200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr22:21949800-21960400 Weak transcription Colonic Mucosa Colon
22 chr22:21949800-21965200 Weak transcription Brain Anterior Caudate brain
23 chr22:21949800-21965400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr22:21949800-21965400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr22:21949800-21968800 Weak transcription Stomach Mucosa stomach
26 chr22:21950000-21956400 Weak transcription Primary B cells from cord blood blood
27 chr22:21950000-21956400 Weak transcription Lung lung
28 chr22:21950000-21956800 Weak transcription Right Atrium heart
29 chr22:21950000-21960000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr22:21950000-21960400 Weak transcription Brain Germinal Matrix brain
31 chr22:21950000-21965200 Weak transcription H9 Cell Line embryonic stem cell
32 chr22:21950000-21965200 Weak transcription Rectal Smooth Muscle rectum
33 chr22:21950000-21965400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr22:21950000-21978600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr22:21950200-21956200 Weak transcription Primary hematopoietic stem cells blood
36 chr22:21950200-21956400 Weak transcription NHEK skin
37 chr22:21950200-21965200 Weak transcription H1 Cell Line embryonic stem cell
38 chr22:21950200-21965200 Weak transcription NH-A brain
39 chr22:21950200-21965400 Weak transcription Placenta Amnion Placenta Amnion
40 chr22:21950600-21956400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr22:21950600-21964000 Weak transcription HUVEC blood vessel
42 chr22:21950600-21964400 Weak transcription Fetal Brain Female brain
43 chr22:21950600-21965200 Weak transcription Fetal Lung lung
44 chr22:21950600-21965400 Weak transcription Aorta Aorta
45 chr22:21950800-21957000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr22:21950800-21963600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr22:21950800-21964400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr22:21951200-21955800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr22:21951200-21959200 Weak transcription Brain Hippocampus Middle brain
50 chr22:21951200-21961200 Weak transcription Placenta Placenta

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