Variant report

Variant	rs863009
Chromosome Location	chr1:159191080-159191081
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12084987	0.87[AFR][1000 genomes]
rs2254681	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2427832	0.86[EUR][1000 genomes]
rs2427834	0.86[EUR][1000 genomes]
rs2494258	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2494260	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2494261	0.86[EUR][1000 genomes]
rs2511212	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs863011	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs863012	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs863017	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159190200-159191200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr1:159190400-159193400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:159190800-159191200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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