Variant report

Variant	rs867830
Chromosome Location	chr18:44814272-44814273
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12954657	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1347341	1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1434513	0.80[EUR][1000 genomes]
rs17724709	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2668771	0.85[YRI][hapmap]
rs2684831	0.94[EUR][1000 genomes]
rs2684832	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs2684857	0.81[EUR][1000 genomes]
rs28477282	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs949017	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44810400-44819200	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr18:44813400-44815400	Weak transcription	Pancreas	Pancrea
3	chr18:44813800-44814600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr18:44814200-44814400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr18:44814200-44814400	Enhancers	Brain Hippocampus Middle	brain
6	chr18:44814200-44815200	Enhancers	Brain Cingulate Gyrus	brain
7	chr18:44814200-44815600	Bivalent Enhancer	Brain Germinal Matrix	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links