Variant report

Variant rs876534
Chromosome Location chr12:29928026-29928027
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:29904200-29928600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr12:29906600-29928400 Weak transcription Fetal Muscle Trunk muscle
3 chr12:29916000-29931400 Weak transcription Pancreas Pancrea
4 chr12:29920400-29928400 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr12:29921600-29934000 Weak transcription Fetal Kidney kidney
6 chr12:29922600-29929600 Weak transcription HSMM muscle
7 chr12:29922600-29931000 Weak transcription Colon Smooth Muscle Colon
8 chr12:29922600-29931800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr12:29922600-29934000 Weak transcription NHLF lung
10 chr12:29922800-29928200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr12:29922800-29928200 Weak transcription Fetal Muscle Leg muscle
12 chr12:29922800-29930600 Weak transcription Stomach Smooth Muscle stomach
13 chr12:29922800-29931200 Weak transcription Aorta Aorta
14 chr12:29922800-29933800 Weak transcription Hela-S3 cervix
15 chr12:29924600-29931600 Weak transcription Adipose Nuclei Adipose
16 chr12:29925200-29928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr12:29925400-29934000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr12:29925600-29934200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr12:29926000-29928400 Enhancers Psoas Muscle Psoas
20 chr12:29926200-29928400 Weak transcription HMEC breast
21 chr12:29926400-29929200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
22 chr12:29926400-29931400 Weak transcription Ovary ovary
23 chr12:29926400-29931600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:29926600-29931400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr12:29926800-29928600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr12:29926800-29929000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr12:29927000-29929600 Weak transcription Left Ventricle heart
28 chr12:29927000-29930800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr12:29927000-29931400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr12:29927200-29931400 Weak transcription Fetal Heart heart
31 chr12:29927200-29931800 Weak transcription Right Atrium heart
32 chr12:29927200-29931800 Weak transcription Right Ventricle heart
33 chr12:29927200-29931800 Weak transcription Spleen Spleen
34 chr12:29927400-29929400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
35 chr12:29927400-29930000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr12:29927600-29929400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
37 chr12:29927600-29929800 ZNF genes & repeats H1 Cell Line embryonic stem cell
38 chr12:29927600-29929800 Strong transcription Muscle Satellite Cultured Cells --
39 chr12:29927800-29928600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr12:29927800-29929800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr12:29927800-29931000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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