The 2.0 version of rSNPBase

Variant report

Variant rs880518
Chromosome Location chr10:97810637-97810638
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97804400-97816600 Weak transcription Esophagus oesophagus
2 chr10:97804600-97816600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr10:97804600-97816600 Weak transcription Placenta Placenta
4 chr10:97804600-97816600 Weak transcription Gastric stomach
5 chr10:97804600-97816800 Weak transcription Ovary ovary
6 chr10:97804600-97817000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr10:97804600-97817000 Weak transcription Aorta Aorta
8 chr10:97804600-97817000 Weak transcription Psoas Muscle Psoas
9 chr10:97804600-97831800 Weak transcription Stomach Mucosa stomach
10 chr10:97804800-97811600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr10:97804800-97816400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr10:97804800-97824200 Weak transcription Small Intestine intestine
13 chr10:97805000-97813200 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr10:97805000-97816400 Weak transcription Brain Hippocampus Middle brain
15 chr10:97805000-97816600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr10:97805000-97816600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr10:97805000-97816600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr10:97805000-97816600 Weak transcription Brain Cingulate Gyrus brain
19 chr10:97805000-97816600 Weak transcription Fetal Stomach stomach
20 chr10:97805000-97816600 Weak transcription Rectal Smooth Muscle rectum
21 chr10:97805000-97816800 Weak transcription Brain Angular Gyrus brain
22 chr10:97805000-97816800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr10:97805000-97816800 Weak transcription Colonic Mucosa Colon
24 chr10:97805000-97816800 Weak transcription Right Ventricle heart
25 chr10:97805000-97816800 Weak transcription Stomach Smooth Muscle stomach
26 chr10:97805000-97816800 Weak transcription Osteobl bone
27 chr10:97805000-97817000 Weak transcription Brain Substantia Nigra brain
28 chr10:97805000-97817000 Weak transcription Fetal Intestine Small intestine
29 chr10:97805000-97817400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr10:97805000-97817600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr10:97805000-97825600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr10:97805200-97816200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr10:97805200-97816200 Weak transcription Liver Liver
34 chr10:97805200-97816200 Weak transcription Colon Smooth Muscle Colon
35 chr10:97805200-97816400 Weak transcription HSMMtube muscle
36 chr10:97805200-97816600 Weak transcription H9 Cell Line embryonic stem cell
37 chr10:97805200-97816600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr10:97805200-97816600 Weak transcription Brain Anterior Caudate brain
39 chr10:97805200-97816600 Weak transcription NHLF lung
40 chr10:97805200-97816800 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr10:97805200-97816800 Weak transcription HMEC breast
42 chr10:97805400-97811600 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr10:97805400-97814000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr10:97805400-97816200 Weak transcription Fetal Kidney kidney
45 chr10:97805400-97816400 Weak transcription Adipose Nuclei Adipose
46 chr10:97805400-97816600 Weak transcription Brain Inferior Temporal Lobe brain
47 chr10:97805400-97816800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr10:97805400-97817000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr10:97805400-97817000 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr10:97805400-97817600 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015