Variant report

Variant rs881427
Chromosome Location chr2:55175282-55175283
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55168800-55193400 Weak transcription Primary B cells from peripheral blood blood
2 chr2:55170400-55190400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:55172400-55175400 Enhancers Fetal Brain Male brain
4 chr2:55172400-55175600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr2:55172400-55176000 Enhancers Fetal Muscle Leg muscle
6 chr2:55172600-55176400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr2:55172800-55175800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:55172800-55175800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr2:55173000-55176600 Weak transcription K562 blood
10 chr2:55173000-55193400 Weak transcription Aorta Aorta
11 chr2:55173200-55175400 Weak transcription H1 Cell Line embryonic stem cell
12 chr2:55173200-55179800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:55173200-55187000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr2:55173200-55203400 Weak transcription Gastric stomach
15 chr2:55173400-55184600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:55173600-55175400 Weak transcription Fetal Muscle Trunk muscle
17 chr2:55173600-55176400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:55173600-55181200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:55173600-55194000 Weak transcription Stomach Smooth Muscle stomach
20 chr2:55173600-55195000 Weak transcription Pancreas Pancrea
21 chr2:55173800-55175600 Enhancers Adipose Nuclei Adipose
22 chr2:55173800-55176200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr2:55173800-55176400 Weak transcription NHLF lung
24 chr2:55173800-55178600 Weak transcription Muscle Satellite Cultured Cells --
25 chr2:55173800-55178800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr2:55173800-55180000 Weak transcription HSMMtube muscle
27 chr2:55174000-55176200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr2:55174000-55176400 Weak transcription NHDF-Ad bronchial
29 chr2:55174000-55178800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:55174000-55178800 Weak transcription HSMM muscle
31 chr2:55174200-55175400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr2:55174200-55175600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:55174400-55176200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:55174400-55176400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:55174600-55175400 Weak transcription Esophagus oesophagus
36 chr2:55174600-55175800 Enhancers HUES6 Cell Line embryonic stem cell
37 chr2:55174800-55175400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:55174800-55194000 Weak transcription Brain Germinal Matrix brain
39 chr2:55175000-55175400 Enhancers Fetal Brain Female brain
40 chr2:55175000-55175600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:55175000-55175600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr2:55175000-55177800 Enhancers Cortex derived primary cultured neurospheres brain
43 chr2:55175200-55175400 Enhancers Brain Angular Gyrus brain
44 chr2:55175200-55175400 Enhancers Brain Hippocampus Middle brain
45 chr2:55175200-55175600 Enhancers Brain Cingulate Gyrus brain
46 chr2:55175200-55175600 Enhancers Brain Inferior Temporal Lobe brain
47 chr2:55175200-55175600 Enhancers Brain Substantia Nigra brain
48 chr2:55175200-55175800 Enhancers Brain Anterior Caudate brain
49 chr2:55175200-55178800 Weak transcription Osteobl bone

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