Variant report

Variant rs881707
Chromosome Location chr5:79549599-79549600
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79542400-79550400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:79543600-79550600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:79543800-79549800 Weak transcription Stomach Smooth Muscle stomach
4 chr5:79544200-79550200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:79544200-79550400 Weak transcription HSMM muscle
6 chr5:79544200-79550600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr5:79544400-79550000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:79544400-79550600 Weak transcription Hela-S3 cervix
9 chr5:79544600-79549800 Weak transcription Primary B cells from cord blood blood
10 chr5:79544600-79549800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr5:79544600-79550400 Weak transcription HSMMtube muscle
12 chr5:79544800-79550400 Weak transcription Muscle Satellite Cultured Cells --
13 chr5:79544800-79550400 Weak transcription GM12878-XiMat blood
14 chr5:79546000-79550400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr5:79546400-79549800 Enhancers Sigmoid Colon Sigmoid Colon
16 chr5:79546600-79549800 Weak transcription Fetal Muscle Trunk muscle
17 chr5:79546800-79549800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:79547000-79549800 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr5:79547400-79550000 Enhancers Adipose Nuclei Adipose
20 chr5:79547600-79549600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr5:79547600-79549800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr5:79547600-79550000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr5:79547600-79550400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr5:79547600-79550400 Enhancers Pancreas Pancrea
25 chr5:79547800-79549800 Enhancers Placenta Placenta
26 chr5:79547800-79549800 Flanking Active TSS HepG2 liver
27 chr5:79547800-79550000 Enhancers Fetal Thymus thymus
28 chr5:79547800-79551000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
29 chr5:79548000-79549600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
30 chr5:79548000-79549600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
31 chr5:79548000-79550000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr5:79548000-79550400 Enhancers Gastric stomach
33 chr5:79548000-79550400 Enhancers Stomach Mucosa stomach
34 chr5:79548200-79549800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
35 chr5:79548200-79550000 Enhancers Fetal Heart heart
36 chr5:79548200-79550400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
37 chr5:79548400-79549600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr5:79548400-79551000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
39 chr5:79548600-79549600 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr5:79548600-79549600 Enhancers Right Ventricle heart
41 chr5:79548600-79549800 Flanking Active TSS Brain Inferior Temporal Lobe brain
42 chr5:79548600-79550800 Flanking Active TSS Duodenum Mucosa Duodenum
43 chr5:79548600-79551000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
44 chr5:79548600-79551200 Flanking Active TSS Liver Liver
45 chr5:79548600-79551200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
46 chr5:79548800-79549600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:79548800-79549600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr5:79548800-79549800 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
49 chr5:79548800-79550000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
50 chr5:79548800-79550400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood

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