Variant report

Variant	rs882084
Chromosome Location	chr8:129983165-129983166
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs16893221	0.83[ASN][1000 genomes]
rs16903928	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57247106	0.86[ASN][1000 genomes]
rs59943811	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60730791	0.86[ASN][1000 genomes]
rs6995520	0.83[ASN][1000 genomes]
rs73708261	1.00[ASN][1000 genomes]
rs7818017	0.85[AMR][1000 genomes]
rs882082	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs894264	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129977000-129985000	Weak transcription	Psoas Muscle	Psoas
2	chr8:129979400-129983400	Weak transcription	NHDF-Ad	bronchial
3	chr8:129979400-129984200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:129979600-129983400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:129979600-129984800	Weak transcription	Osteobl	bone
6	chr8:129979600-129991000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr8:129981400-129983800	ZNF genes & repeats	Dnd41	blood
8	chr8:129982800-129983400	Weak transcription	HSMM	muscle
9	chr8:129982800-129985600	Weak transcription	Thymus	Thymus
10	chr8:129983000-129986000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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