Variant report

Variant	rs883313
Chromosome Location	chr2:72239692-72239693
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10208040	0.83[EUR][1000 genomes]
rs11679009	0.86[ASN][1000 genomes]
rs11679052	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12713768	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1543862	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1878503	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs35090850	0.82[EUR][1000 genomes]
rs4852277	0.86[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4852837	0.87[ASN][1000 genomes]
rs6755787	0.87[ASN][1000 genomes]
rs6759217	0.87[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72232600-72240600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:72237400-72241400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:72237600-72243000	Enhancers	Placenta Amnion	Placenta Amnion
4	chr2:72238200-72240200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr2:72238400-72239800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr2:72239000-72240000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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