Variant report

Variant	rs892353
Chromosome Location	chr8:130601285-130601286
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs17179377	1.00[ASW][hapmap];0.91[CEU][hapmap];1.00[GIH][hapmap];0.82[MKK][hapmap];0.88[YRI][hapmap];0.80[EUR][1000 genomes]
rs17180246	1.00[CEU][hapmap]
rs17180387	0.85[MEX][hapmap]
rs17265074	0.92[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716318	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592600-130603600	Enhancers	Dnd41	blood
2	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
3	chr8:130595200-130602200	Weak transcription	Thymus	Thymus
4	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr8:130595600-130603400	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr8:130596000-130603600	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr8:130599400-130602200	Weak transcription	Fetal Muscle Leg	muscle
8	chr8:130599400-130605200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:130599400-130605400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:130599400-130605600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:130600000-130602400	Weak transcription	Fetal Thymus	thymus
12	chr8:130601200-130602200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:130601200-130602200	Weak transcription	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links