Variant report

Variant	rs893131
Chromosome Location	chr15:35090912-35090913
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350109	chr15:34668106-35534229	Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
2	nsv569133	chr15:34881304-35142566	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	nsv522411	chr15:34953986-35462981	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
4	nsv457106	chr15:35049787-35227613	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
5	nsv569153	chr15:35049787-35227613	Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:35087600-35091200	Weak transcription	Psoas Muscle	Psoas
2	chr15:35087600-35095000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr15:35088000-35091200	Weak transcription	K562	blood
4	chr15:35088000-35091400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr15:35088200-35091200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr15:35088200-35091400	Weak transcription	Pancreas	Pancrea
7	chr15:35088200-35091400	Weak transcription	Spleen	Spleen
8	chr15:35088400-35091000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr15:35088400-35094000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr15:35088600-35091400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr15:35088600-35091400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr15:35088800-35091400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr15:35088800-35091600	Enhancers	Fetal Muscle Leg	muscle
14	chr15:35089200-35091000	Weak transcription	Stomach Smooth Muscle	stomach
15	chr15:35089400-35091000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr15:35089400-35091200	Enhancers	HSMM	muscle
17	chr15:35089400-35091400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr15:35089400-35091400	Weak transcription	Brain Germinal Matrix	brain
19	chr15:35089400-35091400	Weak transcription	Placenta	Placenta
20	chr15:35089400-35091600	Weak transcription	Aorta	Aorta
21	chr15:35089400-35091600	Weak transcription	Ovary	ovary
22	chr15:35089400-35091600	Weak transcription	Right Atrium	heart
23	chr15:35089600-35091400	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr15:35089600-35091400	Enhancers	Fetal Muscle Trunk	muscle
25	chr15:35089600-35091400	Weak transcription	A549	lung
26	chr15:35090000-35091000	Weak transcription	Muscle Satellite Cultured Cells	--
27	chr15:35090000-35091200	Enhancers	HSMMtube	muscle
28	chr15:35090000-35091600	Weak transcription	Right Ventricle	heart
29	chr15:35090200-35091200	Weak transcription	Fetal Lung	lung
30	chr15:35090200-35091400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr15:35090200-35097000	Enhancers	Fetal Heart	heart
32	chr15:35090800-35091200	Enhancers	Hela-S3	cervix

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