The 2.0 version of rSNPBase

Variant report

Variant rs893328
Chromosome Location chr2:153495071-153495072
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153454800-153496600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:153457200-153505000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr2:153463800-153502800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:153464000-153502800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr2:153467200-153504000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:153468600-153495800 Weak transcription Esophagus oesophagus
7 chr2:153469000-153496400 Weak transcription Colonic Mucosa Colon
8 chr2:153469000-153509800 Weak transcription Small Intestine intestine
9 chr2:153469200-153495200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr2:153469600-153496800 Weak transcription HSMM muscle
11 chr2:153471000-153507000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr2:153472000-153522000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr2:153473000-153500600 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:153473800-153496400 Weak transcription Osteobl bone
15 chr2:153474400-153505000 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr2:153477800-153496000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:153477800-153496600 Weak transcription Aorta Aorta
18 chr2:153479400-153496200 Weak transcription NH-A brain
19 chr2:153481200-153502200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:153481200-153502400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:153481400-153502400 Strong transcription Placenta Placenta
22 chr2:153481400-153503000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:153484400-153496000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr2:153484400-153502600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:153484400-153503000 Strong transcription Fetal Muscle Trunk muscle
26 chr2:153484400-153504200 Strong transcription Fetal Muscle Leg muscle
27 chr2:153485200-153500000 Weak transcription Hela-S3 cervix
28 chr2:153485400-153496800 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr2:153486200-153496600 Weak transcription HUVEC blood vessel
30 chr2:153486200-153503000 Strong transcription Fetal Stomach stomach
31 chr2:153487600-153505000 Weak transcription Fetal Thymus thymus
32 chr2:153488600-153503200 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr2:153489000-153495600 Weak transcription Right Ventricle heart
34 chr2:153489000-153496600 Weak transcription Pancreas Pancrea
35 chr2:153489200-153495400 Weak transcription Duodenum Mucosa Duodenum
36 chr2:153489600-153495800 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:153489600-153496400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr2:153490200-153495200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:153490600-153496600 Weak transcription Rectal Smooth Muscle rectum
40 chr2:153491600-153502800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:153491600-153504000 Strong transcription HepG2 liver
42 chr2:153492000-153508200 Weak transcription Primary B cells from cord blood blood
43 chr2:153492200-153502600 Strong transcription Lung lung
44 chr2:153492200-153502800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr2:153492400-153502400 Strong transcription NHEK skin
46 chr2:153492400-153506200 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr2:153492400-153513400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr2:153492600-153496600 Weak transcription Liver Liver
49 chr2:153492600-153497800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:153492600-153501400 Strong transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015