Variant report

Variant	rs916455
Chromosome Location	chr11:636929-636930
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:636853-636980	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr11:636688-637073	A549	lung:	n/a	n/a
3	GABPA	chr11:636682-637076	H1-hESC	embryonic stem cell:	n/a	n/a
4	E2F6	chr11:636411-637328	H1-hESC	embryonic stem cell:	n/a	chr11:637031-637041
5	E2F6	chr11:636567-637248	H1-hESC	embryonic stem cell:	n/a	chr11:637031-637041
6	POLR2A	chr11:636708-637216	H1-neurons	neurons:	n/a	n/a
7	POLR2A	chr11:636398-636997	K562	blood:	n/a	n/a
8	MAX	chr11:636552-637343	H1-hESC	embryonic stem cell:	n/a	chr11:636576-636586 chr11:637105-637116 chr11:637107-637114 chr11:637106-637116
9	MAZ	chr11:636787-637734	IMR90	lung:	n/a	chr11:637105-637116 chr11:637107-637114 chr11:637106-637116
10	MAX	chr11:636522-637815	H1-hESC	embryonic stem cell:	n/a	chr11:636576-636586 chr11:637105-637116 chr11:637107-637114 chr11:637106-637116
11	TEAD4	chr11:636905-637232	H1-hESC	embryonic stem cell:	n/a	n/a
12	POLR2A	chr11:636747-637024	H1-neurons	neurons:	n/a	n/a
13	GABPA	chr11:636719-637214	H1-hESC	embryonic stem cell:	n/a	n/a
14	POLR2A	chr11:636757-636959	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
DRD4	TF binding region

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs752306	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046476	chr11:205983-911945	Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	260 gene(s)	inside rSNPs	diseases
2	nsv896478	chr11:350917-888632	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	234 gene(s)	inside rSNPs	diseases
3	nsv896479	chr11:350917-934594	Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	237 gene(s)	inside rSNPs	diseases
4	nsv896485	chr11:353757-656845	Flanking Bivalent TSS/Enh Weak transcription Active TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	167 gene(s)	inside rSNPs	diseases
5	nsv896486	chr11:353757-662407	ZNF genes & repeats Strong transcription Enhancers Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	169 gene(s)	inside rSNPs	diseases
6	nsv896487	chr11:353757-888632	Flanking Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	234 gene(s)	inside rSNPs	diseases
7	nsv896506	chr11:378188-715420	Flanking Active TSS Strong transcription Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	163 gene(s)	inside rSNPs	diseases
8	nsv469923	chr11:378188-1323564	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	248 gene(s)	inside rSNPs	diseases
9	nsv896510	chr11:385442-647869	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	156 gene(s)	inside rSNPs	diseases
10	nsv896511	chr11:385442-715420	Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	162 gene(s)	inside rSNPs	diseases
11	nsv896533	chr11:406483-647869	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	140 gene(s)	inside rSNPs	diseases
12	esv2758250	chr11:409846-1357392	Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	232 gene(s)	inside rSNPs	diseases
13	esv2759794	chr11:409846-1357392	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	232 gene(s)	inside rSNPs	diseases
14	nsv1053964	chr11:491334-692433	Active TSS Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	138 gene(s)	inside rSNPs	diseases
15	nsv896545	chr11:521302-710558	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	129 gene(s)	inside rSNPs	diseases
16	nsv1039558	chr11:534242-672091	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	124 gene(s)	inside rSNPs	diseases
17	nsv896549	chr11:541930-647869	Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	117 gene(s)	inside rSNPs	diseases
18	esv2829940	chr11:549119-641191	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	116 gene(s)	inside rSNPs	diseases
19	nsv896550	chr11:551405-662407	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	118 gene(s)	inside rSNPs	diseases
20	nsv896551	chr11:551405-888632	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
21	nsv1053653	chr11:553925-697511	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	123 gene(s)	inside rSNPs	diseases
22	nsv540879	chr11:553925-697511	Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	123 gene(s)	inside rSNPs	diseases
23	nsv552857	chr11:557342-641191	Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	116 gene(s)	inside rSNPs	diseases
24	nsv467635	chr11:557342-656845	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	116 gene(s)	inside rSNPs	diseases
25	nsv552858	chr11:557342-656845	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	116 gene(s)	inside rSNPs	diseases
26	nsv552859	chr11:557342-656940	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	116 gene(s)	inside rSNPs	diseases
27	nsv896561	chr11:564295-662407	Flanking Active TSS Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	110 gene(s)	inside rSNPs	diseases
28	nsv552861	chr11:589246-662407	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
29	nsv896562	chr11:589564-662407	Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
30	nsv896563	chr11:589564-888632	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
31	nsv896564	chr11:594264-656845	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
32	nsv896565	chr11:598033-662407	Bivalent/Poised TSS Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
33	esv2762889	chr11:606294-653614	Genic enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
34	nsv896566	chr11:607050-647869	Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
35	nsv896567	chr11:607050-656523	ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
36	nsv896568	chr11:609353-647869	Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
37	nsv896570	chr11:620599-715420	Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
38	nsv896571	chr11:620927-647869	Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
39	nsv896572	chr11:623765-643348	Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
40	nsv552866	chr11:625878-641191	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
41	nsv832043	chr11:631027-758602	Strong transcription Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
42	esv3408304	chr11:635977-638525	Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:616800-641200	Weak transcription	K562	blood
2	chr11:617000-640400	Weak transcription	Dnd41	blood
3	chr11:617200-639800	Weak transcription	Brain Substantia Nigra	brain
4	chr11:625200-637600	Weak transcription	Placenta	Placenta
5	chr11:625800-637200	Weak transcription	Liver	Liver
6	chr11:625800-642600	Weak transcription	Hela-S3	cervix
7	chr11:626400-642000	Weak transcription	HepG2	liver
8	chr11:626800-637000	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr11:628800-637400	Weak transcription	NHLF	lung
10	chr11:628800-642600	Weak transcription	A549	lung
11	chr11:629800-637200	Weak transcription	Rectal Smooth Muscle	rectum
12	chr11:629800-637400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr11:629800-637400	Weak transcription	Colon Smooth Muscle	Colon
14	chr11:633200-641000	Weak transcription	HSMMtube	muscle
15	chr11:633800-637000	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr11:636000-637600	Bivalent Enhancer	Fetal Intestine Large	intestine
17	chr11:636000-639200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
18	chr11:636200-637000	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
19	chr11:636200-637000	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr11:636200-639200	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
21	chr11:636200-639600	Bivalent Enhancer	Fetal Muscle Leg	muscle
22	chr11:636200-639800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
23	chr11:636200-640000	Bivalent Enhancer	Fetal Intestine Small	intestine
24	chr11:636200-641000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
25	chr11:636400-637000	Enhancers	Ovary	ovary
26	chr11:636400-637600	Enhancers	Esophagus	oesophagus
27	chr11:636400-637800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
28	chr11:636400-637800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
29	chr11:636400-638000	Bivalent Enhancer	Primary B cells from peripheral blood	blood
30	chr11:636400-638000	Enhancers	Pancreas	Pancrea
31	chr11:636400-638600	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
32	chr11:636400-639600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
33	chr11:636400-639600	Bivalent Enhancer	Fetal Stomach	stomach
34	chr11:636600-637000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr11:636600-637200	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr11:636600-637400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr11:636600-637400	Enhancers	Brain Inferior Temporal Lobe	brain
38	chr11:636600-637600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
39	chr11:636600-637800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
40	chr11:636600-637800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
41	chr11:636600-637800	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr11:636600-638000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr11:636600-638000	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr11:636600-638600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr11:636600-639200	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
46	chr11:636800-637000	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr11:636800-637000	Bivalent Enhancer	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr11:636800-637000	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
49	chr11:636800-637000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr11:636800-637000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin

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