Variant report

Variant rs9260313
Chromosome Location chr6:29916885-29916886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29911200-29920200 Weak transcription A549 lung
2 chr6:29911200-29921400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:29911600-29920400 Weak transcription Fetal Brain Male brain
4 chr6:29911800-29917200 Strong transcription Fetal Stomach stomach
5 chr6:29911800-29917600 Strong transcription Fetal Intestine Large intestine
6 chr6:29912400-29917200 Genic enhancers Spleen Spleen
7 chr6:29912400-29918000 Strong transcription Fetal Intestine Small intestine
8 chr6:29912600-29921000 Weak transcription Psoas Muscle Psoas
9 chr6:29912800-29924200 Weak transcription Right Atrium heart
10 chr6:29913000-29917200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:29913000-29924000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr6:29913000-29924200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr6:29913200-29917000 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr6:29913200-29917000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr6:29913400-29917000 Strong transcription Stomach Smooth Muscle stomach
16 chr6:29913400-29917800 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr6:29913400-29917800 Weak transcription Hela-S3 cervix
18 chr6:29913400-29918800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr6:29913400-29919600 Weak transcription Fetal Muscle Trunk muscle
20 chr6:29913400-29920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:29913400-29932200 Weak transcription Brain Anterior Caudate brain
22 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
23 chr6:29913600-29917000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr6:29913600-29917200 Strong transcription Duodenum Mucosa Duodenum
25 chr6:29913600-29918800 Weak transcription Muscle Satellite Cultured Cells --
26 chr6:29913600-29919200 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr6:29913600-29920400 Weak transcription HMEC breast
28 chr6:29913600-29921600 Weak transcription NHEK skin
29 chr6:29913600-29924400 Weak transcription H1 Cell Line embryonic stem cell
30 chr6:29913600-29925400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr6:29913800-29917200 Strong transcription Adipose Nuclei Adipose
32 chr6:29913800-29921000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:29913800-29932200 Weak transcription Small Intestine intestine
34 chr6:29914000-29917600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr6:29914000-29918000 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:29914000-29918200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr6:29914000-29918200 Strong transcription Thymus Thymus
38 chr6:29914000-29920600 Weak transcription NHLF lung
39 chr6:29914000-29921000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:29914000-29923800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:29914000-29924200 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr6:29914000-29932200 Weak transcription Colon Smooth Muscle Colon
43 chr6:29914200-29918000 Genic enhancers Primary T cells fromperipheralblood blood
44 chr6:29914200-29918000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr6:29914200-29918200 Strong transcription Primary monocytes fromperipheralblood blood
46 chr6:29914200-29919000 Strong transcription Primary B cells from cord blood blood
47 chr6:29914200-29919200 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr6:29914200-29920800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:29914400-29917200 Strong transcription Brain Hippocampus Middle brain
50 chr6:29914400-29917200 Weak transcription Dnd41 blood

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