Variant report

Variant	rs9262409
Chromosome Location	chrX:122868270-122868271
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:122865390..122868661-chrX:122991432..122995679,4	K562	blood:
2	chrX:122866200..122868503-chrX:122897571..122900669,3	K562	blood:

Variant related genes	Relation type
ENSG00000230376	Chromatin interaction
ENSG00000101966	Chromatin interaction

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs2249168	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2252921	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2252925	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2252926	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2263305	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2263306	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2517406	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2517409	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2517411	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2517412	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2517415	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2517416	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2523907	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2523910	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2523930	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2530688	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2530689	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2530690	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2530694	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2530695	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2844671	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2844673	0.83[AMR][1000 genomes]
rs2844675	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2844676	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6914559	0.81[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:122867200-122870200	Weak transcription	NHLF	lung
2	chrX:122867200-122870400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chrX:122867400-122869600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chrX:122867400-122869600	Weak transcription	Fetal Intestine Small	intestine
5	chrX:122867400-122869600	Weak transcription	A549	lung
6	chrX:122867400-122869600	Weak transcription	HSMMtube	muscle
7	chrX:122867400-122869800	Weak transcription	Fetal Intestine Large	intestine
8	chrX:122867400-122869800	Weak transcription	HepG2	liver
9	chrX:122867400-122869800	Weak transcription	HSMM	muscle
10	chrX:122867400-122869800	Weak transcription	Osteobl	bone
11	chrX:122867400-122870200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chrX:122867400-122870200	Weak transcription	NH-A	brain
13	chrX:122867400-122870200	Weak transcription	NHDF-Ad	bronchial
14	chrX:122867400-122870400	Weak transcription	Fetal Heart	heart
15	chrX:122867400-122872200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chrX:122867400-122874400	Weak transcription	K562	blood
17	chrX:122867600-122870400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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