Variant report

Variant	rs9267325
Chromosome Location	chr6:31461492-31461493
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:31461480-31461630	A549	lung:	n/a	n/a
2	POLR2A	chr6:31461475-31462434	HUVEC	blood vessel:	n/a	n/a
3	TEAD4	chr6:31461487-31462295	K562	blood:	n/a	n/a
4	SIN3AK20	chr6:31461453-31462456	PANC-1	pancreas:	n/a	n/a
5	MAX	chr6:31461463-31462328	A549	lung:	n/a	n/a
6	PML	chr6:31461424-31462326	GM12878	blood:	n/a	n/a
7	CBX3	chr6:31461468-31462341	K562	blood:	n/a	chr6:31461534-31461545
8	BCLAF1	chr6:31461456-31461937	GM12878	blood:	n/a	n/a
9	CTCF	chr6:31461471-31462003	K562	blood:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
10	RAD21	chr6:31461470-31462017	ECC-1	luminal epithelium:	n/a	chr6:31461933-31461947
11	CTCF	chr6:31461403-31462229	HCT-116	colon:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
12	CTCF	chr6:31461357-31462288	SK-N-SH	brain:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
13	TEAD4	chr6:31461492-31462402	K562	blood:	n/a	n/a
14	RAD21	chr6:31461341-31462336	SK-N-SH	brain:	n/a	chr6:31461933-31461947
15	CTCF	chr6:31461489-31461943	T-47D	breast:	n/a	chr6:31461715-31461731
16	TCF12	chr6:31461433-31462041	ECC-1	luminal epithelium:	n/a	n/a
17	RAD21	chr6:31461478-31462044	A549	lung:	n/a	chr6:31461933-31461947
18	CTCF	chr6:31461461-31462004	A549	lung:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
19	CTCF	chr6:31461418-31462432	A549	lung:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
20	PAX5	chr6:31461476-31462293	GM12878	blood:	n/a	chr6:31462162-31462189
21	YY1	chr6:31461490-31462296	HepG2	liver:	n/a	n/a
22	CTCF	chr6:31461437-31462130	K562	blood:	n/a	chr6:31461715-31461731 chr6:31461934-31461947
23	RAD21	chr6:31461396-31462140	HCT-116	colon:	n/a	chr6:31461933-31461947
24	RAD21	chr6:31461409-31462145	HCT-116	colon:	n/a	chr6:31461933-31461947
25	FOXM1	chr6:31461472-31462297	GM12878	blood:	n/a	n/a
26	FOXM1	chr6:31461422-31462964	GM12878	blood:	n/a	n/a
27	TCF12	chr6:31461490-31462016	A549	lung:	n/a	n/a
28	NR2F2	chr6:31461482-31462400	K562	blood:	n/a	n/a
29	MYBL2	chr6:31461491-31462263	HepG2	liver:	n/a	n/a
30	SMC3	chr6:31461370-31462377	SK-N-SH	brain:	n/a	n/a
31	JUN	chr6:31461194-31462511	K562	blood:	n/a	n/a
32	POLR2A	chr6:31461456-31463255	PANC-1	pancreas:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:31460948..31461720-chr6:31514497..31515098,2	MCF-7	breast:
2	chr6:31365846..31369030-chr6:31460300..31464467,7	K562	blood:
3	chr6:31459795..31462964-chr6:31499493..31502905,3	K562	blood:
4	chr6:31461147..31462941-chr6:31618531..31620077,2	K562	blood:
5	chr6:31460255..31464524-chr6:31513189..31516444,5	K562	blood:
6	chr6:31164998..31165548-chr6:31461463..31462414,2	Hela-S3	cervix:
7	chr6:31460341..31462076-chr6:31501405..31503283,2	K562	blood:
8	chr6:31461159..31464326-chr6:31493652..31499334,8	K562	blood:
9	chr6:31461211..31463484-chr6:31498734..31500993,3	K562	blood:
10	chr6:31459710..31467567-chr6:31506191..31511027,18	MCF-7	breast:
11	chr6:31459935..31461853-chr6:31464053..31467261,4	K562	blood:
12	chr6:31461211..31462110-chr6:31566059..31566733,2	MCF-7	breast:
13	chr6:31457500..31459013-chr6:31460280..31462623,2	K562	blood:
14	chr6:31365716..31368807-chr6:31460300..31464467,6	K562	blood:
15	chr6:31459878..31461795-chr6:31557754..31559945,2	K562	blood:
16	chr6:31460672..31463218-chr6:31514855..31517423,2	MCF-7	breast:
17	chr6:31458384..31468965-chr6:31503613..31512721,28	K562	blood:
18	chr6:31461360..31462200-chr6:31564947..31565457,2	K562	blood:
19	chr6:31459984..31462302-chr6:31464597..31467280,2	MCF-7	breast:
20	chr6:31367361..31367866-chr6:31461272..31461916,4	MCF-7	breast:
21	chr6:31460486..31468205-chr6:31503942..31512721,23	K562	blood:

Variant related genes	Relation type
MICB	TF binding region
ENSG00000204511	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000225499	Chromatin interaction
ENSG00000206344	Chromatin interaction
ENSG00000206337	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000204498	Chromatin interaction
ENSG00000201680	Chromatin interaction
ENSG00000213760	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000201785	Chromatin interaction
ENSG00000254870	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000204516	Chromatin interaction

Extended variants
information (count: 65 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:65 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
2	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
3	nsv428140	chr6:31028290-31462106	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	89 gene(s)	inside rSNPs	diseases
4	esv2758042	chr6:31028290-31497106	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	101 gene(s)	inside rSNPs	diseases
5	esv2759414	chr6:31028290-31542308	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	151 gene(s)	inside rSNPs	diseases
6	esv3381377	chr6:31192213-31498578	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
7	esv3340592	chr6:31192248-31498535	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
8	nsv1021052	chr6:31206639-31485736	Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	61 gene(s)	inside rSNPs	diseases
9	nsv1022451	chr6:31279535-31485736	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
10	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
11	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
12	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
13	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
14	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
15	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
16	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
17	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
18	nsv517441	chr6:31336100-31463963	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
19	nsv1018463	chr6:31337336-31525275	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
20	nsv538189	chr6:31337336-31525275	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
21	nsv432868	chr6:31338844-31721033	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	250 gene(s)	inside rSNPs	diseases
22	esv2752115	chr6:31352880-31498721	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
23	esv1831710	chr6:31352945-31477763	Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
24	nsv1034727	chr6:31353329-31465103	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
25	esv2752118	chr6:31353329-31481321	Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
26	esv2757162	chr6:31353329-31542308	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	99 gene(s)	inside rSNPs	diseases
27	esv1827731	chr6:31353930-31471391	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
28	esv1833123	chr6:31353930-31471391	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
29	esv1825070	chr6:31354819-31463963	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
30	esv1832352	chr6:31355100-31477763	Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
31	esv3475036	chr6:31356065-31465064	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
32	esv3475037	chr6:31356065-31465064	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
33	esv34684	chr6:31359621-31474688	Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
34	esv2752119	chr6:31359621-31498521	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
35	esv2752121	chr6:31359648-31465795	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
36	nsv1021984	chr6:31360095-31465103	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
37	nsv1030071	chr6:31360095-31465795	Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
38	nsv1020595	chr6:31360095-31474688	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
39	nsv1022499	chr6:31360095-31485174	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
40	nsv1031110	chr6:31362310-31465103	Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
41	nsv1026211	chr6:31362310-31474688	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
42	nsv1018716	chr6:31362310-31481299	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
43	nsv1015252	chr6:31362930-31465103	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
44	esv3434932	chr6:31377226-31471978	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
45	esv3362717	chr6:31377565-31479170	Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
46	nsv432874	chr6:31379821-31498521	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
47	nsv1022089	chr6:31383848-31465795	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
48	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
49	nsv1021331	chr6:31388423-31465103	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
50	nsv432877	chr6:31412961-31528690	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31438200-31461600	Weak transcription	Small Intestine	intestine
2	chr6:31443000-31461600	Weak transcription	Right Atrium	heart
3	chr6:31446200-31461600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr6:31456000-31461600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:31456200-31461800	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr6:31457200-31461600	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr6:31458200-31461600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:31458800-31461600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
9	chr6:31458800-31461600	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr6:31459000-31461600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:31459000-31461600	Enhancers	Primary T cells fromperipheralblood	blood
12	chr6:31459200-31461600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr6:31459200-31461600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr6:31459400-31461600	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr6:31459400-31461600	Enhancers	Primary B cells from peripheral blood	blood
16	chr6:31459400-31461600	Enhancers	Primary T helper naive cells from peripheral blood	blood
17	chr6:31459400-31461600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
18	chr6:31459400-31461600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr6:31459400-31466600	Active TSS	GM12878-XiMat	blood
20	chr6:31459800-31461600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:31459800-31461600	Enhancers	Duodenum Mucosa	Duodenum
22	chr6:31460000-31461600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr6:31460000-31461600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr6:31460200-31461600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr6:31460200-31461600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr6:31460200-31461600	Weak transcription	Liver	Liver
27	chr6:31460200-31461600	Weak transcription	Brain Angular Gyrus	brain
28	chr6:31460200-31461600	Weak transcription	A549	lung
29	chr6:31460200-31461600	Weak transcription	NHDF-Ad	bronchial
30	chr6:31460200-31461600	Weak transcription	NHLF	lung
31	chr6:31460400-31461600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr6:31460400-31461600	Weak transcription	NHEK	skin
33	chr6:31461000-31461600	Enhancers	Primary hematopoietic stem cells short term culture	blood
34	chr6:31461000-31461800	Flanking Active TSS	Dnd41	blood
35	chr6:31461000-31462800	Active TSS	Muscle Satellite Cultured Cells	--
36	chr6:31461200-31461600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr6:31461200-31461600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
38	chr6:31461200-31461600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr6:31461200-31461600	Enhancers	Primary T killer memory cells from peripheral blood	blood
40	chr6:31461200-31461600	Enhancers	Duodenum Smooth Muscle	Duodenum
41	chr6:31461200-31461600	Enhancers	HSMM	muscle
42	chr6:31461200-31461600	Enhancers	Osteobl	bone
43	chr6:31461200-31461800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr6:31461200-31461800	Flanking Active TSS	HUVEC	blood vessel
45	chr6:31461200-31461800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
46	chr6:31461200-31462000	Active TSS	HUES6 Cell Line	embryonic stem cell
47	chr6:31461200-31462000	Flanking Active TSS	Fetal Thymus	thymus
48	chr6:31461200-31462800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr6:31461200-31463800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr6:31461200-31465000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin

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