Variant report

Variant	rs9269762
Chromosome Location	chr6:32548321-32548322
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:32541266..32542954-chr6:32547776..32551278,3	MCF-7	breast:
2	chr6:32531056..32533444-chr6:32548227..32552178,3	MCF-7	breast:
3	chr6:32542997..32546229-chr6:32547055..32549461,4	MCF-7	breast:
4	chr6:32547452..32553622-chr6:32554180..32560378,10	MCF-7	breast:
5	chr6:32519836..32522790-chr6:32547584..32550109,2	MCF-7	breast:
6	chr6:32546755..32548791-chr6:32550343..32552231,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000196126	Chromatin interaction

Extended variants
information (count: 633 )
Associated
traits (count: 63 )

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs1064697	0.80[EUR][1000 genomes]
rs701831	0.82[AFR][1000 genomes]
rs9269698	0.84[ASN][1000 genomes]
rs9269795	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:629 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601977	chr6:31949352-32651056	Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv602000	chr6:31952422-32552416	Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
3	nsv602019	chr6:31953467-32779803	Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
4	nsv602054	chr6:31972034-32779803	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
5	nsv934227	chr6:32371384-32810913	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
6	esv2758044	chr6:32371753-32705434	Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
7	esv2759416	chr6:32371753-32705434	Active TSS Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
8	nsv427753	chr6:32371753-32767352	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
9	nsv428142	chr6:32371753-32767352	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
10	nsv432879	chr6:32374622-32690945	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
11	nsv830631	chr6:32383667-32586115	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	esv18770	chr6:32411907-32779836	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
13	esv33476	chr6:32411986-32652962	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
14	nsv533504	chr6:32411987-32552134	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
15	nsv884743	chr6:32417130-32566156	Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
16	nsv1020340	chr6:32429594-32557301	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
17	nsv1025703	chr6:32429894-32574171	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
18	nsv432880	chr6:32430167-32658310	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
19	nsv7883	chr6:32430499-32655443	Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
20	nsv602115	chr6:32430729-32549275	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
21	nsv602116	chr6:32430729-32560262	Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
22	nsv602117	chr6:32430729-32625928	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
23	nsv602118	chr6:32430729-32779642	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
24	nsv602120	chr6:32431292-32549935	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
25	nsv602121	chr6:32431292-32560327	Enhancers Strong transcription Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
26	esv3584531	chr6:32431552-32573771	Weak transcription Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
27	nsv442978	chr6:32431552-32573771	Bivalent/Poised TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
28	nsv602125	chr6:32431711-32560262	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
29	nsv602127	chr6:32431854-32549275	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
30	esv1840532	chr6:32438598-32596966	Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
31	esv3475047	chr6:32439349-32555913	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
32	esv3475048	chr6:32439349-32555913	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
33	esv3345775	chr6:32439506-32555917	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
34	nsv602130	chr6:32440481-32555659	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
35	esv3475051	chr6:32440545-32559211	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
36	esv3475053	chr6:32440545-32559211	Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
37	nsv870228	chr6:32441109-32624786	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
38	esv1801558	chr6:32441150-32561201	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
39	nsv602135	chr6:32441392-32644859	Bivalent/Poised TSS Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
40	esv1798764	chr6:32441577-32573629	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
41	esv2829855	chr6:32442086-32558946	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
42	esv13755	chr6:32443285-32662922	Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
43	nsv602140	chr6:32443451-32569687	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
44	nsv602141	chr6:32443451-32569691	Bivalent/Poised TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
45	nsv602142	chr6:32443451-32571961	Genic enhancers Enhancers Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
46	nsv602143	chr6:32443451-32572251	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
47	nsv602145	chr6:32443876-32560158	Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
48	nsv602146	chr6:32443876-32560385	Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
49	nsv602148	chr6:32445650-32555659	Enhancers Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
50	esv2763944	chr6:32448098-32635296	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

mRNA abundance (count:63)

SNP	Gene	Cis/trans	Tissue	Source
rs9269762	HLA-DQB1	cis	Thyroid	GTEx
rs9269762	HLA-DRB6	cis	lung	GTEx
rs9269762	HLA-DQA2	cis	Thyroid	GTEx
rs9269762	HLA-DRB5	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DQA2	cis	lung	GTEx
rs9269762	HLA-DQB1-AS1	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQB1-AS1	cis	Adipose Subcutaneous	GTEx
rs9269762	HLA-DRB5	cis	Whole Blood	GTEx
rs9269762	HLA-DRB1	cis	Esophagus Muscularis	GTEx
rs9269762	HLA-DRB1	cis	Thyroid	GTEx
rs9269762	HLA-DRB5	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQB1	cis	lung	GTEx
rs9269762	HLA-DQA2	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DQA1	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB5	cis	Esophagus Muscularis	GTEx
rs9269762	HLA-DRB1	cis	Heart Left Ventricle	GTEx
rs9269762	HLA-DQB1	cis	Nerve Tibial	GTEx
rs9269762	HLA-DRB1	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQB1-AS1	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB6	cis	Nerve Tibial	GTEx
rs9269762	HLA-DRB6	cis	Adipose Subcutaneous	GTEx
rs9269762	HLA-DRB6	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DRB5	cis	Adipose Subcutaneous	GTEx
rs9269762	HLA-DQB1	cis	Adipose Subcutaneous	GTEx
rs9269762	HLA-DRB1	cis	Esophagus Mucosa	GTEx
rs9269762	HLA-DRB1	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DRB5	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB6	cis	Esophagus Mucosa	GTEx
rs9269762	HLA-DRB1	cis	Nerve Tibial	GTEx
rs9269762	HLA-DQB2	cis	Whole Blood	GTEx
rs9269762	HLA-DRB1	cis	Adipose Subcutaneous	GTEx
rs9269762	HLA-DQB1	cis	Artery Aorta	GTEx
rs9269762	HLA-DRB5	cis	Nerve Tibial	GTEx
rs9269762	HLA-DRB6	cis	Thyroid	GTEx
rs9269762	HLA-DQB1	cis	Whole Blood	GTEx
rs9269762	HLA-DRB1	cis	Whole Blood	GTEx
rs9269762	HLA-DRB5	cis	Artery Aorta	GTEx
rs9269762	HLA-DQA2	cis	Whole Blood	GTEx
rs9269762	HLA-DQA2	cis	Artery Tibial	GTEx
rs9269762	HLA-DQB1	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB5	cis	Stomach	GTEx
rs9269762	HLA-DRB6	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB6	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQB1-AS1	cis	Nerve Tibial	GTEx
rs9269762	HLA-DRB1	cis	Artery Tibial	GTEx
rs9269762	HLA-DRB5	cis	Esophagus Mucosa	GTEx
rs9269762	HLA-DRB1	cis	Artery Aorta	GTEx
rs9269762	HLA-DRB1	cis	lung	GTEx
rs9269762	HLA-DQB1-AS1	cis	Whole Blood	GTEx
rs9269762	HLA-DRB5	cis	Thyroid	GTEx
rs9269762	HLA-DRB1	cis	Stomach	GTEx
rs9269762	HLA-DRB5	cis	lung	GTEx
rs9269762	HLA.DRB5	cis	multi-tissue	Pritchard
rs9269762	HLA-DQB1-AS1	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DRB5	cis	Heart Left Ventricle	GTEx
rs9269762	HLA-DQA2	cis	Nerve Tibial	GTEx
rs9269762	HLA-DQA1	cis	Whole Blood	GTEx
rs9269762	HLA-DRB6	cis	Whole Blood	GTEx
rs9269762	HLA-DRB6	cis	Artery Aorta	GTEx
rs9269762	HLA-DQB1	cis	Muscle Skeletal	GTEx
rs9269762	HLA-DQB1	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQA1	cis	Skin Sun Exposed Lower leg	GTEx
rs9269762	HLA-DQA2	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:32538800-32551400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr6:32543000-32551400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr6:32543800-32551800	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:32544000-32551400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr6:32544000-32551400	Weak transcription	Gastric	stomach
6	chr6:32545000-32551400	Weak transcription	Colonic Mucosa	Colon
7	chr6:32545200-32549200	Strong transcription	Primary B cells from cord blood	blood
8	chr6:32545200-32550000	Strong transcription	Duodenum Mucosa	Duodenum
9	chr6:32545200-32552600	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr6:32545600-32549600	Weak transcription	Fetal Thymus	thymus
11	chr6:32546200-32551000	Weak transcription	Stomach Mucosa	stomach
12	chr6:32546400-32549600	Strong transcription	Rectal Mucosa Donor 29	rectum
13	chr6:32546600-32549600	Strong transcription	Spleen	Spleen
14	chr6:32546800-32548400	Weak transcription	Rectal Smooth Muscle	rectum
15	chr6:32546800-32552200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr6:32547000-32548800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr6:32547000-32551200	Weak transcription	Primary T cells from cord blood	blood
18	chr6:32547000-32552800	Weak transcription	Primary hematopoietic stem cells	blood
19	chr6:32547200-32549800	Strong transcription	Duodenum Smooth Muscle	Duodenum
20	chr6:32547200-32551400	Weak transcription	Primary T helper cells fromperipheralblood	blood
21	chr6:32547200-32551600	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr6:32547400-32551400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr6:32547600-32550400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
24	chr6:32547800-32548600	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr6:32547800-32549800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr6:32548000-32549400	Strong transcription	Primary monocytes fromperipheralblood	blood
27	chr6:32548200-32548400	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr6:32548200-32548400	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr6:32548200-32548600	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
30	chr6:32548200-32548600	Strong transcription	Right Ventricle	heart
31	chr6:32548200-32549800	Strong transcription	Lung	lung
32	chr6:32548200-32550000	Genic enhancers	GM12878-XiMat	blood
33	chr6:32548200-32550200	Strong transcription	Adipose Nuclei	Adipose
34	chr6:32548200-32550400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr6:32548200-32550800	Genic enhancers	Primary B cells from peripheral blood	blood

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