Variant report

Variant	rs928627
Chromosome Location	chr20:16622039-16622040
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs13038362	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16998035	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1984120	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2050406	0.94[ASN][1000 genomes]
rs2184501	0.88[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs34110662	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34830968	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4814523	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6034561	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6135816	0.96[ASN][1000 genomes]
rs6135818	0.98[ASN][1000 genomes]
rs6135819	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6135820	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6135823	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6135828	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6135829	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73597787	0.96[ASN][1000 genomes]
rs964216	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16605600-16628800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr20:16619400-16622400	Weak transcription	Fetal Kidney	kidney
3	chr20:16620400-16622400	Weak transcription	HSMM	muscle
4	chr20:16620800-16623400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr20:16621800-16622800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr20:16621800-16622800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr20:16621800-16623800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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