| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv933805 |
chr5:1450724-1941619 |
Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
96 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv880740 |
chr5:1468287-1671200 |
Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv881554 |
chr5:1468287-1696932 |
Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
49 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv817407 |
chr5:1495354-2191460 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
107 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv881096 |
chr5:1503610-1671200 |
Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
48 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv880788 |
chr5:1629407-1671200 |
Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv881328 |
chr5:1637461-1671200 |
Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1016383 |
chr5:1658338-1775551 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1034552 |
chr5:1658338-1856553 |
Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
44 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv537606 |
chr5:1658338-1856553 |
Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
44 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv511296 |
chr5:1661397-1670369 |
Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
esv3368612 |
chr5:1661552-1664550 |
Bivalent/Poised TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv3385491 |
chr5:1663002-1665300 |
Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
esv2617458 |
chr5:1663059-1664672 |
Weak transcription ZNF genes & repeats Bivalent/Poised TSS Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
nsv513212 |
chr5:1663090-1664500 |
Weak transcription Bivalent/Poised TSS Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
esv3335 |
chr5:1663487-1664418 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
esv3436679 |
chr5:1663615-1664146 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
esv2152150 |
chr5:1663625-1664450 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
esv3501697 |
chr5:1663653-1664379 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
esv3501698 |
chr5:1663653-1664379 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
esv3468668 |
chr5:1663658-1664392 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 22 |
esv3468667 |
chr5:1663679-1664362 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 23 |
esv3352624 |
chr5:1663684-1664324 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 24 |
esv3468669 |
chr5:1663721-1664291 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 25 |
esv3346622 |
chr5:1663731-1664371 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
rSNPs within LD-proxies of this variant (count:4)
