Variant report

Variant	rs9321331
Chromosome Location	chr6:132520910-132520911
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1321268	1.00[AMR][1000 genomes]
rs9493184	1.00[AMR][1000 genomes]
rs9493206	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs9493228	0.89[AFR][1000 genomes]
rs9493236	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132512000-132523800	Weak transcription	Aorta	Aorta
2	chr6:132518600-132521200	Enhancers	HSMMtube	muscle
3	chr6:132518800-132521400	Enhancers	HSMM	muscle
4	chr6:132519200-132521400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:132519600-132521000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr6:132519600-132530600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr6:132520000-132521000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:132520200-132523000	Weak transcription	Fetal Muscle Leg	muscle
9	chr6:132520600-132521000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:132520600-132521000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:132520600-132521000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:132520600-132521000	Flanking Active TSS	NH-A	brain
13	chr6:132520600-132521000	Flanking Active TSS	NHLF	lung
14	chr6:132520600-132521000	Flanking Active TSS	Osteobl	bone
15	chr6:132520600-132521400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
16	chr6:132520800-132521000	Flanking Active TSS	NHDF-Ad	bronchial
17	chr6:132520800-132521200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:132520800-132521400	Enhancers	Fetal Stomach	stomach
19	chr6:132520800-132523600	Weak transcription	Small Intestine	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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