Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10149037	0.90[ASN][1000 genomes]
rs11539461	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11624314	0.90[ASN][1000 genomes]
rs11844300	0.90[ASN][1000 genomes]
rs12432582	0.90[EUR][1000 genomes]
rs12433521	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12435676	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12897689	0.90[ASN][1000 genomes]
rs17751406	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17751412	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17824214	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17824322	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2063997	0.81[ASN][1000 genomes]
rs34180883	0.87[EUR][1000 genomes]
rs4903581	0.82[EUR][1000 genomes]
rs6574374	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7149534	0.90[ASN][1000 genomes]
rs7156671	0.90[ASN][1000 genomes]
rs8007503	0.81[ASN][1000 genomes]
rs8010520	0.90[ASN][1000 genomes]
rs8018509	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832835	chr14:77906706-78095207	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77936200-77948600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:77936400-77946000	Weak transcription	Brain Angular Gyrus	brain
3	chr14:77936600-77947200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:77940600-77948600	Weak transcription	Fetal Kidney	kidney
5	chr14:77942400-77949000	Weak transcription	Placenta	Placenta
6	chr14:77945000-77948800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:77945000-77951800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr14:77945400-77947200	Weak transcription	HepG2	liver

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