Variant report

Variant	rs9323686
Chromosome Location	chr14:80952875-80952876
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10131256	0.81[AMR][1000 genomes]
rs10220537	0.82[AMR][1000 genomes]
rs10498538	0.81[AMR][1000 genomes]
rs12147846	0.83[AMR][1000 genomes]
rs61979242	0.84[AMR][1000 genomes]
rs61979251	0.85[AMR][1000 genomes]
rs61979253	0.80[AMR][1000 genomes]
rs6574579	0.82[AMR][1000 genomes]
rs6574580	0.82[AMR][1000 genomes]
rs6574583	0.83[AMR][1000 genomes]
rs7143237	0.81[AMR][1000 genomes]
rs7149914	0.81[AMR][1000 genomes]
rs7156166	0.82[AMR][1000 genomes]
rs8020992	0.83[AMR][1000 genomes]
rs8021020	0.82[AMR][1000 genomes]
rs8021228	0.83[AMR][1000 genomes]
rs8022385	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80939200-80980800	Weak transcription	Primary T cells from cord blood	blood
2	chr14:80941600-80989200	Weak transcription	Left Ventricle	heart
3	chr14:80941800-80956800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr14:80944200-80957600	Weak transcription	Fetal Thymus	thymus
5	chr14:80944600-80956800	Weak transcription	HSMM	muscle
6	chr14:80945000-80956800	Weak transcription	Dnd41	blood
7	chr14:80951800-81003000	Weak transcription	Psoas Muscle	Psoas
8	chr14:80952400-80957400	Weak transcription	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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