The 2.0 version of rSNPBase

Variant report

Variant rs9324142
Chromosome Location chr1:85327046-85327047
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85289400-85330800 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr1:85313000-85332800 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr1:85313600-85330600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:85313600-85357200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:85314000-85330400 Weak transcription Pancreas Pancrea
6 chr1:85314600-85328400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:85315600-85336400 Weak transcription Right Ventricle heart
8 chr1:85319400-85336400 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:85320600-85354800 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:85320800-85327200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:85321000-85342800 Weak transcription Right Atrium heart
12 chr1:85321800-85332400 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:85322800-85355800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:85324200-85328400 Enhancers Primary T cells from cord blood blood
15 chr1:85324200-85328400 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:85324400-85342000 Weak transcription Left Ventricle heart
17 chr1:85324600-85327200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:85325000-85327200 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:85325200-85327200 Weak transcription Thymus Thymus
20 chr1:85326000-85329800 Weak transcription Fetal Heart heart
21 chr1:85326200-85328200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:85326200-85335000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:85326400-85328200 Weak transcription HMEC breast
24 chr1:85326400-85328400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:85326400-85328400 Weak transcription NHEK skin
26 chr1:85326600-85328200 Enhancers Primary T helper cells PMA-I stimulated --
27 chr1:85326600-85328600 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr1:85326600-85328800 Enhancers Primary T cells fromperipheralblood blood
29 chr1:85326800-85328400 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr1:85326800-85328800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr1:85326800-85328800 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr1:85326800-85329200 Enhancers Primary monocytes fromperipheralblood blood
33 chr1:85327000-85327800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:85327000-85327800 Enhancers Monocytes-CD14+_RO01746 blood
35 chr1:85327000-85328400 Enhancers Primary T helper cells fromperipheralblood blood
36 chr1:85327000-85328400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:85327000-85328400 Enhancers Fetal Intestine Small intestine
38 chr1:85327000-85328600 Flanking Active TSS GM12878-XiMat blood
39 chr1:85327000-85328800 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015