Variant report

Variant	rs9327022
Chromosome Location	chr5:116322703-116322704
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10040194	0.89[AMR][1000 genomes]
rs10040196	0.86[AMR][1000 genomes]
rs10071164	0.82[AMR][1000 genomes]
rs10079735	0.83[AMR][1000 genomes]
rs10478319	0.89[AMR][1000 genomes]
rs10478320	0.89[AMR][1000 genomes]
rs13157896	0.81[AMR][1000 genomes]
rs1350573	0.81[AMR][1000 genomes]
rs1459083	0.85[AMR][1000 genomes]
rs1459091	0.83[AMR][1000 genomes]
rs1459092	0.81[AMR][1000 genomes]
rs1459094	0.84[AMR][1000 genomes]
rs1903111	0.85[AMR][1000 genomes]
rs2199145	0.81[AMR][1000 genomes]
rs3900640	0.81[AMR][1000 genomes]
rs4568398	0.81[AMR][1000 genomes]
rs4920944	0.87[AMR][1000 genomes]
rs6594991	0.81[AMR][1000 genomes]
rs6594993	0.85[AMR][1000 genomes]
rs6594994	0.89[AMR][1000 genomes]
rs6594995	0.83[AMR][1000 genomes]
rs6594996	0.89[AMR][1000 genomes]
rs6595002	0.83[AMR][1000 genomes]
rs6897596	0.84[AMR][1000 genomes]
rs7716867	0.85[AMR][1000 genomes]
rs7728400	0.81[AMR][1000 genomes]
rs9327023	0.84[AMR][1000 genomes]
rs979883	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020292	chr5:116183712-116349633	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1033379	chr5:116244963-116464338	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1016586	chr5:116317968-116377074	Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:116321800-116324800	Weak transcription	Brain Cingulate Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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