The 2.0 version of rSNPBase

Variant report

Variant rs9333461
Chromosome Location chr1:165618320-165618321
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165602000-165622800 Weak transcription Primary hematopoietic stem cells blood
2 chr1:165602200-165624200 Weak transcription Dnd41 blood
3 chr1:165603000-165619800 Weak transcription HSMMtube muscle
4 chr1:165603800-165624200 Weak transcription Brain Germinal Matrix brain
5 chr1:165603800-165631200 Weak transcription Fetal Kidney kidney
6 chr1:165604400-165628000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:165604600-165620000 Weak transcription Fetal Brain Female brain
8 chr1:165604800-165623000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:165604800-165628400 Weak transcription H1 Cell Line embryonic stem cell
10 chr1:165604800-165632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:165605000-165620200 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr1:165605200-165620000 Weak transcription Primary T cells from cord blood blood
13 chr1:165605200-165628800 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr1:165605400-165620200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:165605600-165622600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:165606200-165659600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:165606400-165619600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:165606800-165622800 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:165607200-165619200 Weak transcription NH-A brain
20 chr1:165607200-165620000 Weak transcription Fetal Brain Male brain
21 chr1:165607200-165623000 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:165607400-165620000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:165607400-165620200 Weak transcription NHLF lung
24 chr1:165609400-165619000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:165609600-165619000 Weak transcription Fetal Muscle Trunk muscle
26 chr1:165609800-165620000 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:165610600-165619000 Weak transcription Placenta Placenta
28 chr1:165610600-165630800 Weak transcription Small Intestine intestine
29 chr1:165611200-165619000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:165611400-165622400 Weak transcription Placenta Amnion Placenta Amnion
31 chr1:165611600-165619000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:165611600-165619200 Weak transcription Osteobl bone
33 chr1:165612000-165622200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:165612200-165619000 Weak transcription Aorta Aorta
35 chr1:165613800-165621800 Weak transcription Brain Angular Gyrus brain
36 chr1:165614000-165619400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:165614800-165618400 Enhancers Right Ventricle heart
38 chr1:165615000-165619200 Weak transcription HSMM muscle
39 chr1:165615200-165618600 Enhancers Colon Smooth Muscle Colon
40 chr1:165615200-165628400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:165615400-165622800 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr1:165615400-165630000 Weak transcription GM12878-XiMat blood
43 chr1:165615600-165619000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:165615600-165619200 Weak transcription NHDF-Ad bronchial
45 chr1:165615600-165620200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:165615600-165622000 Weak transcription HMEC breast
47 chr1:165615600-165629600 Weak transcription Primary B cells from cord blood blood
48 chr1:165615600-165630200 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:165615600-165631000 Weak transcription NHEK skin
50 chr1:165615800-165618600 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015