The 2.0 version of rSNPBase

Variant report

Variant rs9342834
Chromosome Location chr6:72094466-72094467
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72061600-72097000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:72076200-72103200 Weak transcription Aorta Aorta
3 chr6:72077600-72094800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr6:72077800-72097000 Weak transcription Psoas Muscle Psoas
5 chr6:72077800-72097200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr6:72078200-72095400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:72079800-72098800 Weak transcription Brain Substantia Nigra brain
8 chr6:72083400-72094600 Weak transcription Fetal Intestine Large intestine
9 chr6:72083800-72097800 Weak transcription Placenta Placenta
10 chr6:72084200-72097000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr6:72084200-72106600 Weak transcription Fetal Muscle Trunk muscle
12 chr6:72084400-72094800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr6:72084400-72094800 Weak transcription Fetal Intestine Small intestine
14 chr6:72084400-72099000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:72085600-72096800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:72085800-72105400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:72087400-72098200 Weak transcription Colonic Mucosa Colon
18 chr6:72088400-72097800 Weak transcription Fetal Muscle Leg muscle
19 chr6:72088600-72097000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:72088800-72095000 Weak transcription HSMMtube muscle
21 chr6:72088800-72101000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:72090400-72101000 Weak transcription Gastric stomach
23 chr6:72091000-72094600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:72091000-72095200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:72091200-72094600 Weak transcription Adipose Nuclei Adipose
26 chr6:72091200-72095600 Weak transcription NHEK skin
27 chr6:72091400-72095200 Weak transcription NH-A brain
28 chr6:72091800-72097200 Weak transcription Fetal Stomach stomach
29 chr6:72093200-72094600 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr6:72093400-72101200 Genic enhancers Hela-S3 cervix
31 chr6:72093400-72106400 Weak transcription Spleen Spleen
32 chr6:72093600-72094800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:72093600-72094800 Weak transcription Fetal Kidney kidney
34 chr6:72093600-72094800 Enhancers A549 lung
35 chr6:72093600-72094800 Weak transcription NHDF-Ad bronchial
36 chr6:72093600-72095400 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr6:72093600-72096200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr6:72093600-72097800 Weak transcription Left Ventricle heart
39 chr6:72093600-72097800 Weak transcription Pancreas Pancrea
40 chr6:72093600-72097800 Weak transcription Right Ventricle heart
41 chr6:72093600-72099000 Enhancers Muscle Satellite Cultured Cells --
42 chr6:72093600-72099000 Weak transcription Lung lung
43 chr6:72093600-72099200 Enhancers HMEC breast
44 chr6:72093800-72094600 Weak transcription HSMM muscle
45 chr6:72093800-72095000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr6:72093800-72097200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:72094000-72094800 Weak transcription Brain Hippocampus Middle brain
48 chr6:72094000-72095800 Enhancers Fetal Lung lung
49 chr6:72094000-72096000 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr6:72094000-72096000 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015