Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10943583	0.97[ASN][1000 genomes]
rs1158575	0.85[ASN][1000 genomes]
rs1319575	0.82[ASN][1000 genomes]
rs1998252	0.85[ASN][1000 genomes]
rs2135770	0.96[ASN][1000 genomes]
rs2321775	0.97[ASN][1000 genomes]
rs3918524	0.84[ASN][1000 genomes]
rs4706066	0.85[ASN][1000 genomes]
rs6900794	0.98[ASN][1000 genomes]
rs6901015	0.97[ASN][1000 genomes]
rs6924048	0.97[ASN][1000 genomes]
rs6938951	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6939263	0.97[ASN][1000 genomes]
rs7766517	0.84[ASN][1000 genomes]
rs7766791	0.84[ASN][1000 genomes]
rs9341742	0.85[ASN][1000 genomes]
rs9341750	0.97[ASN][1000 genomes]
rs9343820	0.98[ASN][1000 genomes]
rs9350773	0.85[ASN][1000 genomes]
rs9352628	0.85[ASN][1000 genomes]
rs9359343	0.85[ASN][1000 genomes]
rs9359350	0.97[ASN][1000 genomes]
rs9361426	0.85[ASN][1000 genomes]
rs9361437	0.97[ASN][1000 genomes]
rs9361438	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3391082	chr6:79443282-79504068	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
2	esv3433815	chr6:79443282-79536957	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79479400-79481200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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