The 2.0 version of rSNPBase

Variant report

Variant rs9358825
Chromosome Location chr6:25027546-25027547
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25011200-25035600 Weak transcription Spleen Spleen
2 chr6:25024600-25027600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr6:25024800-25027600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:25024800-25027600 Enhancers HMEC breast
5 chr6:25024800-25028200 Enhancers NHEK skin
6 chr6:25024800-25028400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:25025000-25028000 Enhancers Primary monocytes fromperipheralblood blood
8 chr6:25025000-25028600 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr6:25025200-25028600 Enhancers Fetal Thymus thymus
10 chr6:25025400-25028400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr6:25025600-25027800 Enhancers HUES48 Cell Line embryonic stem cell
12 chr6:25025600-25028000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:25026000-25027800 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr6:25026000-25028200 Enhancers Fetal Lung lung
15 chr6:25026200-25028000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:25026400-25028000 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr6:25026400-25033600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:25026600-25027600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr6:25026800-25028200 Flanking Active TSS GM12878-XiMat blood
20 chr6:25027000-25028200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr6:25027000-25028200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
22 chr6:25027000-25028200 Flanking Active TSS Dnd41 blood
23 chr6:25027000-25028400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
24 chr6:25027000-25028600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr6:25027000-25028600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
26 chr6:25027200-25028000 Active TSS Duodenum Mucosa Duodenum
27 chr6:25027200-25028200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr6:25027400-25027600 Flanking Active TSS Primary T cells from cord blood blood
29 chr6:25027400-25027800 Flanking Active TSS Primary hematopoietic stem cells blood
30 chr6:25027400-25027800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
31 chr6:25027400-25027800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:25027400-25027800 Flanking Active TSS Thymus Thymus
33 chr6:25027400-25028000 Enhancers Primary neutrophils fromperipheralblood blood
34 chr6:25027400-25028000 Flanking Active TSS Primary B cells from cord blood blood
35 chr6:25027400-25028000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
36 chr6:25027400-25028000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
37 chr6:25027400-25028000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr6:25027400-25028200 Enhancers H1 Cell Line embryonic stem cell
39 chr6:25027400-25028200 Flanking Active TSS Primary B cells from peripheral blood blood
40 chr6:25027400-25028200 Flanking Active TSS Primary T cells fromperipheralblood blood
41 chr6:25027400-25028400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
42 chr6:25027400-25028400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
43 chr6:25027400-25028400 Enhancers Lung lung

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Last update: Aug 31, 2015