Variant report

Variant	rs9358964
Chromosome Location	chr6:72293143-72293144
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1032166	0.83[CHB][hapmap]
rs1386192	0.81[ASN][1000 genomes]
rs1486606	0.81[ASN][1000 genomes]
rs1486607	0.81[ASN][1000 genomes]
rs1486610	0.81[ASN][1000 genomes]
rs272213	0.84[JPT][hapmap]
rs4449595	0.81[ASN][1000 genomes]
rs6917926	0.81[ASN][1000 genomes]
rs6918255	0.81[ASN][1000 genomes]
rs6923050	0.81[ASN][1000 genomes]
rs747549	0.81[ASN][1000 genomes]
rs9341328	0.81[ASN][1000 genomes]
rs9342854	0.81[ASN][1000 genomes]
rs9342855	0.81[ASN][1000 genomes]
rs9342856	0.81[ASN][1000 genomes]
rs9351833	0.81[ASN][1000 genomes]
rs9358965	0.81[ASN][1000 genomes]
rs9360467	0.81[ASN][1000 genomes]
rs9360468	0.81[ASN][1000 genomes]
rs9360469	0.81[ASN][1000 genomes]
rs9360470	0.81[ASN][1000 genomes]
rs9360471	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830685	chr6:72244007-72410757	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72289400-72295400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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