Variant report

Variant rs937053
Chromosome Location chr1:113246229-113246230
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113229200-113248000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:113238000-113246400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr1:113238800-113246600 Genic enhancers Placenta Amnion Placenta Amnion
4 chr1:113239400-113246600 Genic enhancers Fetal Intestine Large intestine
5 chr1:113240400-113247000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
6 chr1:113240400-113247200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:113240600-113246800 Genic enhancers Colonic Mucosa Colon
8 chr1:113240600-113247000 Genic enhancers Fetal Muscle Trunk muscle
9 chr1:113240600-113247000 Genic enhancers Fetal Muscle Leg muscle
10 chr1:113240600-113247200 Genic enhancers Placenta Placenta
11 chr1:113240800-113246400 Genic enhancers Pancreas Pancrea
12 chr1:113240800-113246600 Genic enhancers Adipose Nuclei Adipose
13 chr1:113240800-113247200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:113241000-113246600 Genic enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:113241200-113247000 Genic enhancers Cortex derived primary cultured neurospheres brain
16 chr1:113241200-113247200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:113241400-113246400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:113241400-113246600 Genic enhancers HMEC breast
19 chr1:113241600-113247000 Genic enhancers Fetal Intestine Small intestine
20 chr1:113241600-113249200 Enhancers Primary B cells from peripheral blood blood
21 chr1:113241800-113247000 Genic enhancers Colon Smooth Muscle Colon
22 chr1:113242000-113248000 Enhancers Primary B cells from cord blood blood
23 chr1:113242400-113247000 Genic enhancers Fetal Stomach stomach
24 chr1:113242400-113247000 Genic enhancers Spleen Spleen
25 chr1:113242400-113247000 Genic enhancers NHLF lung
26 chr1:113242800-113247000 Enhancers Brain Substantia Nigra brain
27 chr1:113242800-113247200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:113242800-113247800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:113243000-113246600 Genic enhancers Rectal Mucosa Donor 29 rectum
30 chr1:113243000-113247000 Enhancers Brain Angular Gyrus brain
31 chr1:113243200-113246400 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:113243200-113246800 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
33 chr1:113243400-113246400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:113243400-113246800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:113243400-113246800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:113243600-113246600 Genic enhancers Osteobl bone
37 chr1:113243600-113247000 Genic enhancers A549 lung
38 chr1:113243800-113246600 Genic enhancers HSMMtube muscle
39 chr1:113243800-113247200 Weak transcription Fetal Brain Female brain
40 chr1:113244000-113246600 Genic enhancers Rectal Mucosa Donor 31 rectum
41 chr1:113244000-113246600 Genic enhancers NHEK skin
42 chr1:113244000-113246800 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr1:113244000-113246800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:113244000-113246800 Genic enhancers Muscle Satellite Cultured Cells --
45 chr1:113244000-113246800 Genic enhancers Skeletal Muscle Female skeletal muscle
46 chr1:113244000-113247000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
47 chr1:113244000-113247200 Weak transcription Brain Germinal Matrix brain
48 chr1:113244200-113246400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:113244200-113246400 Genic enhancers K562 blood
50 chr1:113244200-113246800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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