Variant report

Variant rs9378949
Chromosome Location chr6:5434528-5434529
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5399200-5440000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr6:5403200-5439800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:5403400-5445200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:5403600-5437600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:5405400-5439800 Weak transcription Pancreas Pancrea
6 chr6:5407400-5439600 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr6:5412800-5437000 Weak transcription Ovary ovary
8 chr6:5412800-5439400 Weak transcription Spleen Spleen
9 chr6:5413400-5435200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:5413400-5442800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr6:5417000-5440400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr6:5420200-5436200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:5421200-5435400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:5421600-5455000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:5421600-5455400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr6:5421600-5457400 Weak transcription Fetal Intestine Small intestine
17 chr6:5422800-5444000 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr6:5423000-5436200 Weak transcription NHLF lung
19 chr6:5424000-5435000 Weak transcription Adipose Nuclei Adipose
20 chr6:5424400-5440000 Weak transcription Small Intestine intestine
21 chr6:5425200-5435600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr6:5426200-5439400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:5426400-5436200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:5427800-5434800 Weak transcription A549 lung
25 chr6:5428200-5437800 Weak transcription GM12878-XiMat blood
26 chr6:5428600-5437200 Weak transcription Dnd41 blood
27 chr6:5429000-5439400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr6:5429200-5443000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:5429400-5435200 Weak transcription NHDF-Ad bronchial
30 chr6:5429800-5435200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:5429800-5435200 Weak transcription HSMM muscle
32 chr6:5429800-5435600 Weak transcription Brain Angular Gyrus brain
33 chr6:5429800-5442600 Weak transcription NHEK skin
34 chr6:5430000-5435400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr6:5430000-5443600 Weak transcription Right Ventricle heart
36 chr6:5430200-5440000 Weak transcription Liver Liver
37 chr6:5430400-5441800 Weak transcription Stomach Smooth Muscle stomach
38 chr6:5430400-5443600 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:5430600-5439800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr6:5430600-5443600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr6:5431200-5435200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:5431400-5435200 Weak transcription Osteobl bone
43 chr6:5431400-5439400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:5431600-5439800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:5431800-5435600 Weak transcription Primary T cells from cord blood blood
46 chr6:5431800-5435800 Weak transcription Fetal Muscle Trunk muscle
47 chr6:5431800-5436600 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr6:5431800-5439400 Weak transcription HepG2 liver
49 chr6:5432000-5435200 Weak transcription HSMMtube muscle
50 chr6:5432000-5437800 Weak transcription Primary T cells fromperipheralblood blood

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