The 2.0 version of rSNPBase

Variant report

Variant rs9380635
Chromosome Location chr6:11921076-11921077
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11917600-11921200 Weak transcription Right Atrium heart
2 chr6:11918000-11922200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
3 chr6:11918200-11921800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
4 chr6:11918200-11921800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:11918200-11922200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:11918200-11922200 Enhancers HSMMtube muscle
7 chr6:11918400-11922400 Enhancers NHEK skin
8 chr6:11918400-11927800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:11918600-11921400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:11919000-11921200 Weak transcription Small Intestine intestine
11 chr6:11919000-11922200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr6:11919400-11921200 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr6:11919400-11921200 Weak transcription Fetal Muscle Trunk muscle
14 chr6:11919400-11921200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr6:11919400-11921200 Weak transcription Right Ventricle heart
16 chr6:11919400-11922200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:11919400-11922200 Enhancers Hela-S3 cervix
18 chr6:11919400-11922200 Enhancers NHDF-Ad bronchial
19 chr6:11919400-11922200 Enhancers NHLF lung
20 chr6:11919400-11924400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:11919400-11927600 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr6:11919400-11927800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:11919800-11921200 Weak transcription Fetal Muscle Leg muscle
24 chr6:11919800-11921200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr6:11919800-11921200 Enhancers K562 blood
26 chr6:11920200-11921200 Weak transcription Fetal Lung lung
27 chr6:11920200-11921200 Weak transcription Fetal Stomach stomach
28 chr6:11920400-11921200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr6:11920400-11921600 Enhancers Colon Smooth Muscle Colon
30 chr6:11920400-11921800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:11920600-11921400 Enhancers Placenta Placenta
32 chr6:11920600-11921400 Enhancers A549 lung
33 chr6:11920600-11921600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr6:11920600-11922200 Enhancers Placenta Amnion Placenta Amnion
35 chr6:11920800-11921600 Enhancers Rectal Smooth Muscle rectum
36 chr6:11920800-11922200 Enhancers Fetal Intestine Large intestine
37 chr6:11920800-11922200 Enhancers HMEC breast
38 chr6:11920800-11922200 Enhancers HSMM muscle
39 chr6:11920800-11922200 Enhancers NH-A brain
40 chr6:11920800-11922400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:11920800-11922400 Enhancers Muscle Satellite Cultured Cells --
42 chr6:11920800-11922400 Enhancers Osteobl bone
43 chr6:11921000-11921600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:11921000-11921600 Enhancers Esophagus oesophagus
45 chr6:11921000-11921800 Enhancers ES-WA7 Cell Line embryonic stem cell
46 chr6:11921000-11921800 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr6:11921000-11922000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:11921000-11922200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr6:11921000-11922400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015