The 2.0 version of rSNPBase

Variant report

Variant rs9380767
Chromosome Location chr6:38642053-38642054
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38609000-38645200 Weak transcription Fetal Intestine Small intestine
2 chr6:38609000-38645600 Weak transcription Left Ventricle heart
3 chr6:38609200-38642400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:38609200-38643400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:38609400-38642200 Weak transcription Stomach Smooth Muscle stomach
6 chr6:38609600-38642800 Weak transcription Brain Cingulate Gyrus brain
7 chr6:38609800-38643000 Weak transcription Colon Smooth Muscle Colon
8 chr6:38612800-38648400 Weak transcription Brain Anterior Caudate brain
9 chr6:38612800-38652800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:38613000-38642400 Weak transcription Fetal Lung lung
11 chr6:38614800-38654800 Weak transcription Brain Angular Gyrus brain
12 chr6:38615200-38642400 Weak transcription Fetal Brain Female brain
13 chr6:38615200-38645200 Weak transcription Ovary ovary
14 chr6:38615200-38649400 Weak transcription Fetal Brain Male brain
15 chr6:38618200-38646200 Weak transcription Aorta Aorta
16 chr6:38618800-38643800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:38619200-38642800 Weak transcription HSMM muscle
18 chr6:38620200-38646200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:38621000-38643400 Weak transcription Fetal Kidney kidney
20 chr6:38621400-38642800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr6:38621600-38642600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:38621800-38642400 Weak transcription Fetal Muscle Leg muscle
23 chr6:38622400-38643200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr6:38622400-38643800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr6:38623400-38645600 Weak transcription Brain Substantia Nigra brain
26 chr6:38624200-38646200 Weak transcription Lung lung
27 chr6:38624600-38643200 Weak transcription Brain Hippocampus Middle brain
28 chr6:38624800-38642400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:38625000-38642600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr6:38626400-38645200 Weak transcription Fetal Stomach stomach
31 chr6:38626600-38642400 Weak transcription Fetal Muscle Trunk muscle
32 chr6:38629400-38644800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr6:38631200-38642400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr6:38637800-38642800 Weak transcription Rectal Smooth Muscle rectum
35 chr6:38638600-38642400 Weak transcription Fetal Intestine Large intestine
36 chr6:38639600-38642400 Weak transcription HepG2 liver
37 chr6:38639800-38642200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr6:38640000-38643000 Weak transcription Duodenum Mucosa Duodenum
39 chr6:38640000-38649400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr6:38640000-38649400 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr6:38640000-38652400 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr6:38640200-38642200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:38640200-38642600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr6:38640200-38650200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:38640400-38642400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr6:38640600-38642200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:38640600-38642400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:38640800-38642400 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:38640800-38642400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:38640800-38642400 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015